PMK

Atlas summary family PMK.

Lineage Coverage

Detected in 734 of 789 public species; click a lineage to inspect its species list.

Algae

Species Distribution

Related Modules

Pathway Position Map

Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.

Curated order

Terpenoid pathway 1501 current-family members Bergman et al. 2024; Karunanithi & Zerbe 2019; Zhang et al. 2023; Lu et al. 2023; Moghe et al. 2023

MVA precursor branch

AACT 337 HMGS 2158 HMGR 3794 MVK 1409 PMK 1501 MVD 1588

MEP precursor branch

DXS 4421 DXR 1551 MCT/IspD 1192 CMK/IspE 1150 MDS/IspF 1197 HDS/IspG 1612 HDR/IspH 1720

IPP/DMAPP and prenyl diphosphate extension

IDI 1579 GPPS 135 FPPS 5839 GGPPS 100

Skeleton formation and tailoring

TPS 36208 CYP71 13248 CYP76 46690 UGT 123661 BAHD 149019

Family Gene List

Gene	Species	Protein ID
bauhinia_variegata_KAI4357197.1	bauhinia_variegata	bauhinia_variegata_KAI4357197.1
Btri1223810033560	bazzania_tridens	Btri1223810033560
Btri1244630047510	bazzania_tridens	Btri1244630047510
Btri1252030054750	bazzania_tridens	Btri1252030054750
Bfucscaffold817_cov1600442920	begonia_fuchsioides	Bfucscaffold817_cov1600442920
Bfucscaffold818_cov1410444290	begonia_fuchsioides	Bfucscaffold818_cov1410444290
Bfucscaffold850_cov1560456340	begonia_fuchsioides	Bfucscaffold850_cov1560456340
Bhis05G0002850.1	benincasa_hispida	Bhis05G0002850.1
Bhis06G0004870.1	benincasa_hispida	Bhis06G0004870.1
Bpatpat_scaffold15560076920.2	beta_patula	Bpatpat_scaffold15560076920.2
Bpatpat_scaffold3530185690.1	beta_patula	Bpatpat_scaffold3530185690.1
BEvul05G0015980.1	beta_vulgaris	BEvul05G0015980.1
BEvul06G0010150.1	beta_vulgaris	BEvul06G0010150.1
BpenContig4280179510.1	betula_pendula	BpenContig4280179510.1
Bpusscaffold_30077670	blasia_pusilla	Bpusscaffold_30077670
Boea_hygrometrica_lcl\|KQ995661.1_cds_KZV46462.1_12309	boea_hygrometrica	Boea_hygrometrica_lcl\|KQ995661.1_cds_KZV46462.1_12309
Boea_hygrometrica_lcl\|KQ998766.1_cds_KZV42890.1_15947	boea_hygrometrica	Boea_hygrometrica_lcl\|KQ998766.1_cds_KZV42890.1_15947
Boea_hygrometrica_lcl\|KV020119.1_cds_KZV15147.1_43675	boea_hygrometrica	Boea_hygrometrica_lcl\|KV020119.1_cds_KZV15147.1_43675
BOERETT00009947	boechera_retrofracta	BOERETT00009947
BOERETT00010348	boechera_retrofracta	BOERETT00010348
BOERETT00014575	boechera_retrofracta	BOERETT00014575
BOERETT00014580	boechera_retrofracta	BOERETT00014580
BOERETT00037894	boechera_retrofracta	BOERETT00037894
BceiScaffold2200180390	bombax_ceiba	BceiScaffold2200180390
BceiScaffold890518080	bombax_ceiba	BceiScaffold890518080
BceiScaffold890518090	bombax_ceiba	BceiScaffold890518090
BOampscaffold1980149110	bonia_amplexicaulis	BOampscaffold1980149110
BOampscaffold83390427290	bonia_amplexicaulis	BOampscaffold83390427290
bothriochloa_decipiens_Bdec00704-RA	bothriochloa_decipiens	bothriochloa_decipiens_Bdec00704-RA
bothriochloa_decipiens_Bdec29126-RA	bothriochloa_decipiens	bothriochloa_decipiens_Bdec29126-RA