PlantSME Plant secondary metabolism enzyme database

Bombax ceiba (bombax_ceiba)

Imported from atlas release summary for Bombax ceiba.

2549
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 774 21 BAHD (273) View species results
Phenylpropanoid pathway 551 11 POD (204) View species results
Alkaloid pathway 541 24 7DLGT (105) View species results
Flavonoid pathway 313 13 UFGT (186) View species results
Rosmarinic acid pathway 212 7 C4H (83) View species results
Steroid pathway 158 12 CAS (71) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2500 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 459 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
BceiScaffold1700133020 Alkaloid 16OMT medium borderline
BceiScaffold1740137140 Alkaloid 16OMT medium borderline
BceiScaffold1740137150 Alkaloid 16OMT medium borderline
BceiScaffold1840146270 Alkaloid 16OMT medium borderline
BceiScaffold1840146280 Alkaloid 16OMT medium borderline
BceiScaffold1840146290 Alkaloid 16OMT medium borderline
BceiScaffold2200185270 Alkaloid 16OMT medium borderline
BceiScaffold2210189470 Alkaloid 16OMT medium borderline
BceiScaffold250231070 Alkaloid 16OMT medium borderline
BceiScaffold250231100 Alkaloid 16OMT medium borderline
BceiScaffold250231120 Alkaloid 16OMT medium borderline
BceiScaffold250231140 Alkaloid 16OMT medium borderline
BceiScaffold2630253500 Alkaloid 16OMT medium borderline
BceiScaffold2730258480 Alkaloid 16OMT medium borderline
BceiScaffold340302660 Alkaloid 16OMT medium borderline
BceiScaffold340302670 Alkaloid 16OMT medium borderline
BceiScaffold340302680 Alkaloid 16OMT medium borderline
BceiScaffold340303020 Alkaloid 16OMT medium borderline
BceiScaffold40335400 Alkaloid 16OMT low borderline
BceiScaffold4150356350 Alkaloid 16OMT medium borderline
BceiScaffold4170356760 Alkaloid 16OMT medium borderline
BceiScaffold4170356780 Alkaloid 16OMT medium borderline
BceiScaffold4700379120 Alkaloid 16OMT medium borderline
BceiScaffold570422370 Alkaloid 16OMT medium borderline
BceiScaffold580425180 Alkaloid 16OMT medium borderline
BceiScaffold5940430630 Alkaloid 16OMT medium borderline
BceiScaffold660458440 Alkaloid 16OMT medium borderline
BceiScaffold660458450 Alkaloid 16OMT medium borderline
BceiScaffold720472060 Alkaloid 16OMT medium borderline
BceiScaffold720472080 Alkaloid 16OMT medium borderline
BceiScaffold720472090 Alkaloid 16OMT medium borderline
BceiScaffold890511810 Alkaloid 16OMT medium borderline
BceiScaffold1030011360 Alkaloid 7DLGT low borderline
BceiScaffold1060023430 Alkaloid 7DLGT low borderline
BceiScaffold1060023440 Alkaloid 7DLGT medium pass
BceiScaffold1060023640 Alkaloid 7DLGT low borderline
BceiScaffold1060023680 Alkaloid 7DLGT medium pass
BceiScaffold110031770 Alkaloid 7DLGT low borderline
BceiScaffold110031880 Alkaloid 7DLGT medium pass
BceiScaffold110031900 Alkaloid 7DLGT low borderline
BceiScaffold110031910 Alkaloid 7DLGT medium pass
BceiScaffold110031930 Alkaloid 7DLGT low borderline
BceiScaffold110031940 Alkaloid 7DLGT medium pass
BceiScaffold110031960 Alkaloid 7DLGT low borderline
BceiScaffold110031990 Alkaloid 7DLGT low borderline
BceiScaffold110033340 Alkaloid 7DLGT low borderline
BceiScaffold1120039990 Alkaloid 7DLGT low borderline
BceiScaffold1160049590 Alkaloid 7DLGT medium pass
BceiScaffold1160049610 Alkaloid 7DLGT high pass
BceiScaffold1250061150 Alkaloid 7DLGT low borderline