PlantSME Plant secondary metabolism enzyme database

Bombax ceiba (bombax_ceiba)

Imported from atlas release summary for Bombax ceiba.

2549
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 774 21 BAHD (273) View species results
Phenylpropanoid pathway 551 11 POD (204) View species results
Alkaloid pathway 541 24 7DLGT (105) View species results
Flavonoid pathway 313 13 UFGT (186) View species results
Rosmarinic acid pathway 212 7 C4H (83) View species results
Steroid pathway 158 12 CAS (71) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2500 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 459 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T16H
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Gene Pathway Family Confidence Status
BceiScaffold1150048030 Alkaloid T16H medium pass
BceiScaffold1250058960 Alkaloid T16H medium borderline
BceiScaffold1470100260 Alkaloid T16H medium borderline
BceiScaffold1560109770 Alkaloid T16H medium borderline
BceiScaffold1560109790 Alkaloid T16H medium borderline
BceiScaffold1560109830 Alkaloid T16H medium borderline
BceiScaffold1680127340 Alkaloid T16H medium borderline
BceiScaffold1680127350 Alkaloid T16H medium borderline
BceiScaffold18770148040 Alkaloid T16H medium borderline
BceiScaffold1890150130 Alkaloid T16H medium borderline
BceiScaffold19190153990 Alkaloid T16H low borderline
BceiScaffold2050164940 Alkaloid T16H medium borderline
BceiScaffold2110174320 Alkaloid T16H medium borderline
BceiScaffold2120176130 Alkaloid T16H medium borderline
BceiScaffold2200184700 Alkaloid T16H medium borderline
BceiScaffold2300204460 Alkaloid T16H medium borderline
BceiScaffold2410214880 Alkaloid T16H low borderline
BceiScaffold250224430 Alkaloid T16H medium borderline
BceiScaffold2580240160 Alkaloid T16H medium borderline
BceiScaffold2580241220 Alkaloid T16H low borderline
BceiScaffold2580247750 Alkaloid T16H low borderline
BceiScaffold2840267810 Alkaloid T16H medium borderline
BceiScaffold2950272520 Alkaloid T16H medium borderline
BceiScaffold30276000 Alkaloid T16H medium borderline
BceiScaffold310287790 Alkaloid T16H medium borderline
BceiScaffold3200291080 Alkaloid T16H medium borderline
BceiScaffold3240295540 Alkaloid T16H medium pass
BceiScaffold3240295600 Alkaloid T16H low borderline
BceiScaffold350305060 Alkaloid T16H medium borderline
BceiScaffold3640317670 Alkaloid T16H medium borderline
BceiScaffold4010345310 Alkaloid T16H medium borderline
BceiScaffold4010345330 Alkaloid T16H low borderline
BceiScaffold4010345340 Alkaloid T16H medium borderline
BceiScaffold4010345350 Alkaloid T16H medium borderline
BceiScaffold40335410 Alkaloid T16H medium borderline
BceiScaffold40336050 Alkaloid T16H low borderline
BceiScaffold4120352630 Alkaloid T16H medium borderline
BceiScaffold4120352640 Alkaloid T16H low borderline
BceiScaffold4120352650 Alkaloid T16H low borderline
BceiScaffold4120353600 Alkaloid T16H medium borderline
BceiScaffold4230358410 Alkaloid T16H medium borderline
BceiScaffold4310365150 Alkaloid T16H medium borderline
BceiScaffold4840389180 Alkaloid T16H medium borderline
BceiScaffold5020402550 Alkaloid T16H medium borderline
BceiScaffold50397210 Alkaloid T16H medium pass
BceiScaffold5650418720 Alkaloid T16H medium borderline
BceiScaffold5660418740 Alkaloid T16H medium borderline
BceiScaffold590429450 Alkaloid T16H medium borderline
BceiScaffold600434850 Alkaloid T16H low borderline
BceiScaffold630439740 Alkaloid T16H medium borderline