PlantSME Plant secondary metabolism enzyme database

Bombax ceiba (bombax_ceiba)

Imported from atlas release summary for Bombax ceiba.

2549
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 774 21 BAHD (273) View species results
Phenylpropanoid pathway 551 11 POD (204) View species results
Alkaloid pathway 541 24 7DLGT (105) View species results
Flavonoid pathway 313 13 UFGT (186) View species results
Rosmarinic acid pathway 212 7 C4H (83) View species results
Steroid pathway 158 12 CAS (71) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2500 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 459 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: PYKS
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Gene Pathway Family Confidence Status
BceiScaffold10001260 Alkaloid PYKS low borderline
BceiScaffold10001270 Alkaloid PYKS low borderline
BceiScaffold1030012440 Alkaloid PYKS low borderline
BceiScaffold1050017260 Alkaloid PYKS low borderline
BceiScaffold1060019970 Alkaloid PYKS high pass
BceiScaffold1060019990 Alkaloid PYKS high pass
BceiScaffold1060024590 Alkaloid PYKS low borderline
BceiScaffold1070028190 Alkaloid PYKS low borderline
BceiScaffold1140043320 Alkaloid PYKS low borderline
BceiScaffold1320075730 Alkaloid PYKS low borderline
BceiScaffold1320075910 Alkaloid PYKS low borderline
BceiScaffold1450097160 Alkaloid PYKS low borderline
BceiScaffold1530106500 Alkaloid PYKS low borderline
BceiScaffold1890150740 Alkaloid PYKS low borderline
BceiScaffold190153400 Alkaloid PYKS low borderline
BceiScaffold2200182110 Alkaloid PYKS low borderline
BceiScaffold2230192690 Alkaloid PYKS low borderline
BceiScaffold240211500 Alkaloid PYKS low borderline
BceiScaffold240211530 Alkaloid PYKS low borderline
BceiScaffold2460219470 Alkaloid PYKS low borderline
BceiScaffold2580238470 Alkaloid PYKS medium pass
BceiScaffold2580241730 Alkaloid PYKS low borderline
BceiScaffold2710257700 Alkaloid PYKS high pass
BceiScaffold2710257710 Alkaloid PYKS medium pass
BceiScaffold2710257720 Alkaloid PYKS medium pass
BceiScaffold2830264130 Alkaloid PYKS low borderline
BceiScaffold2830266100 Alkaloid PYKS high pass
BceiScaffold30279640 Alkaloid PYKS low borderline
BceiScaffold3270298160 Alkaloid PYKS medium pass
BceiScaffold3640317200 Alkaloid PYKS low borderline
BceiScaffold3640318020 Alkaloid PYKS low borderline
BceiScaffold3730321500 Alkaloid PYKS high pass
BceiScaffold3730321510 Alkaloid PYKS high pass
BceiScaffold40334040 Alkaloid PYKS low borderline
BceiScaffold40339970 Alkaloid PYKS high pass
BceiScaffold40339980 Alkaloid PYKS high pass
BceiScaffold4560375020 Alkaloid PYKS low borderline
BceiScaffold5020403060 Alkaloid PYKS low borderline
BceiScaffold540412490 Alkaloid PYKS low borderline
BceiScaffold570423630 Alkaloid PYKS low borderline
BceiScaffold60431580 Alkaloid PYKS high pass
BceiScaffold640443450 Alkaloid PYKS low borderline
BceiScaffold650450760 Alkaloid PYKS high pass
BceiScaffold720470890 Alkaloid PYKS low borderline
BceiScaffold720471570 Alkaloid PYKS high pass
BceiScaffold740477000 Alkaloid PYKS low borderline
BceiScaffold740483330 Alkaloid PYKS low borderline
BceiScaffold950524690 Alkaloid PYKS low borderline