PlantSME Plant secondary metabolism enzyme database

Bombax ceiba (bombax_ceiba)

Imported from atlas release summary for Bombax ceiba.

2549
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 774 21 BAHD (273) View species results
Phenylpropanoid pathway 551 11 POD (204) View species results
Alkaloid pathway 541 24 7DLGT (105) View species results
Flavonoid pathway 313 13 UFGT (186) View species results
Rosmarinic acid pathway 212 7 C4H (83) View species results
Steroid pathway 158 12 CAS (71) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2500 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 459 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CPD/CYP90A1
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Gene Pathway Family Confidence Status
BceiScaffold10300013310 Steroid CPD/CYP90A1 low borderline
BceiScaffold1030013240 Steroid CPD/CYP90A1 low borderline
BceiScaffold1420090830 Steroid CPD/CYP90A1 low borderline
BceiScaffold1440094350 Steroid CPD/CYP90A1 medium borderline
BceiScaffold1640118810 Steroid CPD/CYP90A1 medium borderline
BceiScaffold1640118820 Steroid CPD/CYP90A1 medium borderline
BceiScaffold1810142400 Steroid CPD/CYP90A1 low borderline
BceiScaffold1890150190 Steroid CPD/CYP90A1 low borderline
BceiScaffold1890151000 Steroid CPD/CYP90A1 medium borderline
BceiScaffold1960157180 Steroid CPD/CYP90A1 low borderline
BceiScaffold1960157190 Steroid CPD/CYP90A1 low borderline
BceiScaffold1960157210 Steroid CPD/CYP90A1 low borderline
BceiScaffold2020163500 Steroid CPD/CYP90A1 medium borderline
BceiScaffold2200180290 Steroid CPD/CYP90A1 medium borderline
BceiScaffold220179510 Steroid CPD/CYP90A1 medium borderline
BceiScaffold2300204320 Steroid CPD/CYP90A1 low borderline
BceiScaffold2320208430 Steroid CPD/CYP90A1 low borderline
BceiScaffold2580239210 Steroid CPD/CYP90A1 low borderline
BceiScaffold2580247740 Steroid CPD/CYP90A1 low borderline
BceiScaffold2950272570 Steroid CPD/CYP90A1 medium borderline
BceiScaffold30276000 Steroid CPD/CYP90A1 low borderline
BceiScaffold3240295530 Steroid CPD/CYP90A1 low borderline
BceiScaffold4010345390 Steroid CPD/CYP90A1 low borderline
BceiScaffold40334780 Steroid CPD/CYP90A1 low borderline
BceiScaffold40340360 Steroid CPD/CYP90A1 low borderline
BceiScaffold40340370 Steroid CPD/CYP90A1 low borderline
BceiScaffold430362430 Steroid CPD/CYP90A1 low borderline
BceiScaffold4330365450 Steroid CPD/CYP90A1 low borderline
BceiScaffold4740380190 Steroid CPD/CYP90A1 low borderline
BceiScaffold540414030 Steroid CPD/CYP90A1 low borderline
BceiScaffold570423460 Steroid CPD/CYP90A1 low borderline
BceiScaffold640443740 Steroid CPD/CYP90A1 low borderline
BceiScaffold710464110 Steroid CPD/CYP90A1 low borderline
BceiScaffold820505970 Steroid CPD/CYP90A1 medium borderline