PlantSME Plant secondary metabolism enzyme database

Bombax ceiba (bombax_ceiba)

Imported from atlas release summary for Bombax ceiba.

2549
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 774 21 BAHD (273) View species results
Phenylpropanoid pathway 551 11 POD (204) View species results
Alkaloid pathway 541 24 7DLGT (105) View species results
Flavonoid pathway 313 13 UFGT (186) View species results
Rosmarinic acid pathway 212 7 C4H (83) View species results
Steroid pathway 158 12 CAS (71) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2500 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 459 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status
BceiScaffold1060023840 Steroid BR6OX1/CYP85A1 medium borderline
BceiScaffold1270065550 Steroid BR6OX1/CYP85A1 medium borderline
BceiScaffold1270065560 Steroid BR6OX1/CYP85A1 medium borderline
BceiScaffold1400086530 Steroid BR6OX1/CYP85A1 medium borderline
BceiScaffold16480119360 Steroid BR6OX1/CYP85A1 medium borderline
BceiScaffold16480119370 Steroid BR6OX1/CYP85A1 medium borderline
BceiScaffold1890150130 Steroid BR6OX1/CYP85A1 low borderline
BceiScaffold2200179800 Steroid BR6OX1/CYP85A1 medium borderline
BceiScaffold2200180300 Steroid BR6OX1/CYP85A1 medium borderline
BceiScaffold2200182300 Steroid BR6OX1/CYP85A1 medium borderline
BceiScaffold2200182310 Steroid BR6OX1/CYP85A1 medium borderline
BceiScaffold2420215110 Steroid BR6OX1/CYP85A1 medium borderline
BceiScaffold26580255010 Steroid BR6OX1/CYP85A1 medium borderline
BceiScaffold3030286070 Steroid BR6OX1/CYP85A1 low borderline
BceiScaffold3210293300 Steroid BR6OX1/CYP85A1 medium borderline
BceiScaffold3410303600 Steroid BR6OX1/CYP85A1 medium borderline
BceiScaffold4480371390 Steroid BR6OX1/CYP85A1 medium borderline
BceiScaffold540415670 Steroid BR6OX1/CYP85A1 medium borderline
BceiScaffold600435800 Steroid BR6OX1/CYP85A1 low borderline
BceiScaffold640442450 Steroid BR6OX1/CYP85A1 medium borderline
BceiScaffold640443630 Steroid BR6OX1/CYP85A1 medium borderline
BceiScaffold890515360 Steroid BR6OX1/CYP85A1 medium borderline
BceiScaffold890517290 Steroid BR6OX1/CYP85A1 medium borderline
BceiScaffold890518510 Steroid BR6OX1/CYP85A1 medium borderline
BceiScaffold1050017350 Steroid BR6OX2/CYP85A2 low borderline
BceiScaffold1090030010 Steroid BR6OX2/CYP85A2 low borderline
BceiScaffold1090030030 Steroid BR6OX2/CYP85A2 low borderline
BceiScaffold1090030040 Steroid BR6OX2/CYP85A2 low borderline
BceiScaffold1090030050 Steroid BR6OX2/CYP85A2 low borderline
BceiScaffold110032880 Steroid BR6OX2/CYP85A2 low borderline
BceiScaffold110035130 Steroid BR6OX2/CYP85A2 low borderline
BceiScaffold1120040280 Steroid BR6OX2/CYP85A2 low borderline
BceiScaffold1120040290 Steroid BR6OX2/CYP85A2 low borderline
BceiScaffold1140042390 Steroid BR6OX2/CYP85A2 low borderline
BceiScaffold1170054060 Steroid BR6OX2/CYP85A2 low borderline
BceiScaffold1170054070 Steroid BR6OX2/CYP85A2 low borderline
BceiScaffold1170054080 Steroid BR6OX2/CYP85A2 low borderline
BceiScaffold1170054110 Steroid BR6OX2/CYP85A2 low borderline
BceiScaffold12570063600 Steroid BR6OX2/CYP85A2 low borderline
BceiScaffold1270069380 Steroid BR6OX2/CYP85A2 low borderline
BceiScaffold1320074310 Steroid BR6OX2/CYP85A2 low borderline
BceiScaffold14040089260 Steroid BR6OX2/CYP85A2 low borderline
BceiScaffold14040089270 Steroid BR6OX2/CYP85A2 low borderline
BceiScaffold1410089750 Steroid BR6OX2/CYP85A2 low borderline
BceiScaffold14160090190 Steroid BR6OX2/CYP85A2 low borderline
BceiScaffold1440094940 Steroid BR6OX2/CYP85A2 medium borderline
BceiScaffold1450098210 Steroid BR6OX2/CYP85A2 low borderline
BceiScaffold1470100260 Steroid BR6OX2/CYP85A2 low borderline
BceiScaffold1560109770 Steroid BR6OX2/CYP85A2 low borderline
BceiScaffold1560109790 Steroid BR6OX2/CYP85A2 low borderline