PlantSME Plant secondary metabolism enzyme database

Bombax ceiba (bombax_ceiba)

Imported from atlas release summary for Bombax ceiba.

2549
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 774 21 BAHD (273) View species results
Phenylpropanoid pathway 551 11 POD (204) View species results
Alkaloid pathway 541 24 7DLGT (105) View species results
Flavonoid pathway 313 13 UFGT (186) View species results
Rosmarinic acid pathway 212 7 C4H (83) View species results
Steroid pathway 158 12 CAS (71) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2500 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 459 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IFR
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Gene Pathway Family Confidence Status
BceiScaffold1060022790 Flavonoid IFR low borderline
BceiScaffold1060024650 Flavonoid IFR high pass
BceiScaffold1060025100 Flavonoid IFR low borderline
BceiScaffold1060026180 Flavonoid IFR medium pass
BceiScaffold110036850 Flavonoid IFR low borderline
BceiScaffold1160048920 Flavonoid IFR low borderline
BceiScaffold1170053040 Flavonoid IFR low borderline
BceiScaffold1210056450 Flavonoid IFR low borderline
BceiScaffold1270065690 Flavonoid IFR medium pass
BceiScaffold1270065700 Flavonoid IFR medium pass
BceiScaffold1320075340 Flavonoid IFR low borderline
BceiScaffold1440095150 Flavonoid IFR high pass
BceiScaffold1450097380 Flavonoid IFR low borderline
BceiScaffold1630117790 Flavonoid IFR high pass
BceiScaffold1670125890 Flavonoid IFR low borderline
BceiScaffold1700132560 Flavonoid IFR high pass
BceiScaffold2060166350 Flavonoid IFR low borderline
BceiScaffold2230192940 Flavonoid IFR low borderline
BceiScaffold2300204650 Flavonoid IFR high pass
BceiScaffold2460219520 Flavonoid IFR medium pass
BceiScaffold250226590 Flavonoid IFR low borderline
BceiScaffold250230820 Flavonoid IFR low borderline
BceiScaffold250230850 Flavonoid IFR low borderline
BceiScaffold2580243840 Flavonoid IFR low borderline
BceiScaffold2580247010 Flavonoid IFR low borderline
BceiScaffold2690256350 Flavonoid IFR high pass
BceiScaffold280261480 Flavonoid IFR high pass
BceiScaffold280261490 Flavonoid IFR high pass
BceiScaffold30281070 Flavonoid IFR low borderline
BceiScaffold3030285430 Flavonoid IFR low borderline
BceiScaffold3440304190 Flavonoid IFR high pass
BceiScaffold3510305620 Flavonoid IFR medium pass
BceiScaffold380323030 Flavonoid IFR high pass
BceiScaffold40333900 Flavonoid IFR high pass
BceiScaffold40335230 Flavonoid IFR low borderline
BceiScaffold480387640 Flavonoid IFR low borderline
BceiScaffold480387650 Flavonoid IFR medium pass
BceiScaffold4840389170 Flavonoid IFR low borderline
BceiScaffold5000400420 Flavonoid IFR low borderline
BceiScaffold590425990 Flavonoid IFR high pass
BceiScaffold660459130 Flavonoid IFR low borderline
BceiScaffold720470960 Flavonoid IFR high pass
BceiScaffold740481930 Flavonoid IFR low borderline
BceiScaffold7820487940 Flavonoid IFR low borderline
BceiScaffold890512870 Flavonoid IFR low borderline
BceiScaffold890517970 Flavonoid IFR low borderline
BceiScaffold890518270 Flavonoid IFR high pass
BceiScaffold890518280 Flavonoid IFR medium pass