PlantSME Plant secondary metabolism enzyme database

Bombax ceiba (bombax_ceiba)

Imported from atlas release summary for Bombax ceiba.

2549
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 774 21 BAHD (273) View species results
Phenylpropanoid pathway 551 11 POD (204) View species results
Alkaloid pathway 541 24 7DLGT (105) View species results
Flavonoid pathway 313 13 UFGT (186) View species results
Rosmarinic acid pathway 212 7 C4H (83) View species results
Steroid pathway 158 12 CAS (71) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2500 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 459 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: RAS
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Gene Pathway Family Confidence Status
BceiScaffold1050016500 Rosmarinic Acid RAS low borderline
BceiScaffold1050017000 Rosmarinic Acid RAS medium pass
BceiScaffold1140046160 Rosmarinic Acid RAS medium pass
BceiScaffold1170052040 Rosmarinic Acid RAS low borderline
BceiScaffold1210056570 Rosmarinic Acid RAS medium pass
BceiScaffold1320073170 Rosmarinic Acid RAS low borderline
BceiScaffold1330077240 Rosmarinic Acid RAS low borderline
BceiScaffold1400085500 Rosmarinic Acid RAS medium pass
BceiScaffold1400088260 Rosmarinic Acid RAS low borderline
BceiScaffold1400088270 Rosmarinic Acid RAS medium pass
BceiScaffold1680128000 Rosmarinic Acid RAS medium pass
BceiScaffold1690129690 Rosmarinic Acid RAS medium pass
BceiScaffold1730135560 Rosmarinic Acid RAS medium pass
BceiScaffold1730135600 Rosmarinic Acid RAS medium pass
BceiScaffold1730135610 Rosmarinic Acid RAS medium pass
BceiScaffold1730135670 Rosmarinic Acid RAS medium pass
BceiScaffold1740139040 Rosmarinic Acid RAS medium pass
BceiScaffold1890151080 Rosmarinic Acid RAS medium pass
BceiScaffold1890151830 Rosmarinic Acid RAS low borderline
BceiScaffold210172080 Rosmarinic Acid RAS low borderline
BceiScaffold2210190010 Rosmarinic Acid RAS low borderline
BceiScaffold2300205330 Rosmarinic Acid RAS low borderline
BceiScaffold2460219950 Rosmarinic Acid RAS low borderline
BceiScaffold250224640 Rosmarinic Acid RAS low borderline
BceiScaffold2580238000 Rosmarinic Acid RAS low borderline
BceiScaffold2580242470 Rosmarinic Acid RAS low borderline
BceiScaffold27220258050 Rosmarinic Acid RAS low borderline
BceiScaffold2830266380 Rosmarinic Acid RAS low borderline
BceiScaffold3070287070 Rosmarinic Acid RAS medium pass
BceiScaffold3600313630 Rosmarinic Acid RAS low borderline
BceiScaffold3920330090 Rosmarinic Acid RAS low borderline
BceiScaffold40332780 Rosmarinic Acid RAS low borderline
BceiScaffold40333640 Rosmarinic Acid RAS low borderline
BceiScaffold4400368330 Rosmarinic Acid RAS low borderline
BceiScaffold4560374160 Rosmarinic Acid RAS medium pass
BceiScaffold540413230 Rosmarinic Acid RAS low borderline
BceiScaffold540417100 Rosmarinic Acid RAS medium pass
BceiScaffold540417110 Rosmarinic Acid RAS medium pass
BceiScaffold600436700 Rosmarinic Acid RAS low borderline
BceiScaffold660458520 Rosmarinic Acid RAS low borderline
BceiScaffold720471810 Rosmarinic Acid RAS low borderline
BceiScaffold740481180 Rosmarinic Acid RAS medium pass
BceiScaffold80500580 Rosmarinic Acid RAS low borderline
BceiScaffold880509280 Rosmarinic Acid RAS medium pass
BceiScaffold880509300 Rosmarinic Acid RAS medium pass
BceiScaffold880509330 Rosmarinic Acid RAS medium pass
BceiScaffold8820510110 Rosmarinic Acid RAS medium pass
BceiScaffold8820510120 Rosmarinic Acid RAS medium pass
BceiScaffold920520450 Rosmarinic Acid RAS low borderline
BceiScaffold9890526770 Rosmarinic Acid RAS medium pass