PlantSME Plant secondary metabolism enzyme database

Bombax ceiba (bombax_ceiba)

Imported from atlas release summary for Bombax ceiba.

2549
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 774 21 BAHD (273) View species results
Phenylpropanoid pathway 551 11 POD (204) View species results
Alkaloid pathway 541 24 7DLGT (105) View species results
Flavonoid pathway 313 13 UFGT (186) View species results
Rosmarinic acid pathway 212 7 C4H (83) View species results
Steroid pathway 158 12 CAS (71) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2500 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 459 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Gene Pathway Family Confidence Status
BceiScaffold100005880 Alkaloid T3O medium pass
BceiScaffold10300013310 Alkaloid T3O medium pass
BceiScaffold1030013240 Alkaloid T3O medium pass
BceiScaffold1060023840 Alkaloid T3O medium pass
BceiScaffold1090030020 Alkaloid T3O medium borderline
BceiScaffold110035130 Alkaloid T3O medium pass
BceiScaffold1120040280 Alkaloid T3O medium pass
BceiScaffold1120040290 Alkaloid T3O medium pass
BceiScaffold1140042390 Alkaloid T3O medium borderline
BceiScaffold1150048020 Alkaloid T3O medium borderline
BceiScaffold11890055110 Alkaloid T3O medium pass
BceiScaffold1250060880 Alkaloid T3O medium pass
BceiScaffold1270065550 Alkaloid T3O medium pass
BceiScaffold1270065560 Alkaloid T3O medium pass
BceiScaffold1270066250 Alkaloid T3O medium borderline
BceiScaffold12770070300 Alkaloid T3O medium borderline
BceiScaffold1320073500 Alkaloid T3O medium pass
BceiScaffold1320074310 Alkaloid T3O medium borderline
BceiScaffold1370082020 Alkaloid T3O medium borderline
BceiScaffold1380082300 Alkaloid T3O medium borderline
BceiScaffold1380082310 Alkaloid T3O medium borderline
BceiScaffold1400086840 Alkaloid T3O low borderline
BceiScaffold14040089260 Alkaloid T3O medium pass
BceiScaffold14040089270 Alkaloid T3O medium pass
BceiScaffold1410089740 Alkaloid T3O medium borderline
BceiScaffold1420090830 Alkaloid T3O low borderline
BceiScaffold1440094320 Alkaloid T3O low borderline
BceiScaffold1440094330 Alkaloid T3O low borderline
BceiScaffold1440094940 Alkaloid T3O medium borderline
BceiScaffold1450097670 Alkaloid T3O medium pass
BceiScaffold1560109780 Alkaloid T3O medium borderline
BceiScaffold1560109800 Alkaloid T3O medium borderline
BceiScaffold1560109810 Alkaloid T3O medium borderline
BceiScaffold1560109820 Alkaloid T3O medium borderline
BceiScaffold1560109840 Alkaloid T3O medium borderline
BceiScaffold15650113440 Alkaloid T3O medium borderline
BceiScaffold1640118780 Alkaloid T3O medium pass
BceiScaffold1640118790 Alkaloid T3O low borderline
BceiScaffold1640118810 Alkaloid T3O medium pass
BceiScaffold1680127750 Alkaloid T3O low borderline
BceiScaffold16900131300 Alkaloid T3O medium borderline
BceiScaffold1700132280 Alkaloid T3O medium borderline
BceiScaffold1740138230 Alkaloid T3O medium pass
BceiScaffold1740138770 Alkaloid T3O medium pass
BceiScaffold1840146220 Alkaloid T3O medium borderline
BceiScaffold1840146320 Alkaloid T3O medium pass
BceiScaffold1840146330 Alkaloid T3O medium pass
BceiScaffold1870147550 Alkaloid T3O medium borderline
BceiScaffold1870147560 Alkaloid T3O medium borderline
BceiScaffold1890149140 Alkaloid T3O medium borderline