PlantSME Plant secondary metabolism enzyme database

Bombax ceiba (bombax_ceiba)

Imported from atlas release summary for Bombax ceiba.

2549
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 774 21 BAHD (273) View species results
Phenylpropanoid pathway 551 11 POD (204) View species results
Alkaloid pathway 541 24 7DLGT (105) View species results
Flavonoid pathway 313 13 UFGT (186) View species results
Rosmarinic acid pathway 212 7 C4H (83) View species results
Steroid pathway 158 12 CAS (71) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2500 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 459 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: HCT
Reset
Gene Pathway Family Confidence Status
BceiScaffold1050017000 Phenylpropanoid HCT medium pass
BceiScaffold1120041340 Phenylpropanoid HCT medium pass
BceiScaffold1140046160 Phenylpropanoid HCT medium pass
BceiScaffold1210056570 Phenylpropanoid HCT medium pass
BceiScaffold1320073170 Phenylpropanoid HCT low borderline
BceiScaffold1320073780 Phenylpropanoid HCT low borderline
BceiScaffold1320073790 Phenylpropanoid HCT low borderline
BceiScaffold1400085500 Phenylpropanoid HCT medium pass
BceiScaffold14150090150 Phenylpropanoid HCT medium pass
BceiScaffold1420090670 Phenylpropanoid HCT medium pass
BceiScaffold14930102800 Phenylpropanoid HCT low borderline
BceiScaffold15120104730 Phenylpropanoid HCT low borderline
BceiScaffold1670120240 Phenylpropanoid HCT low borderline
BceiScaffold1670120250 Phenylpropanoid HCT medium pass
BceiScaffold1670120270 Phenylpropanoid HCT medium pass
BceiScaffold1670120280 Phenylpropanoid HCT low borderline
BceiScaffold1670120290 Phenylpropanoid HCT low borderline
BceiScaffold1670120300 Phenylpropanoid HCT low borderline
BceiScaffold1680128000 Phenylpropanoid HCT medium pass
BceiScaffold1690129690 Phenylpropanoid HCT medium pass
BceiScaffold1690131000 Phenylpropanoid HCT low borderline
BceiScaffold1730135540 Phenylpropanoid HCT low borderline
BceiScaffold1730135550 Phenylpropanoid HCT low borderline
BceiScaffold1730135560 Phenylpropanoid HCT low borderline
BceiScaffold1730135570 Phenylpropanoid HCT medium pass
BceiScaffold1730135590 Phenylpropanoid HCT low borderline
BceiScaffold1730135600 Phenylpropanoid HCT low borderline
BceiScaffold1730135610 Phenylpropanoid HCT low borderline
BceiScaffold1730135630 Phenylpropanoid HCT low borderline
BceiScaffold1730135650 Phenylpropanoid HCT low borderline
BceiScaffold1730135660 Phenylpropanoid HCT medium pass
BceiScaffold1730135670 Phenylpropanoid HCT medium pass
BceiScaffold1740139040 Phenylpropanoid HCT medium pass
BceiScaffold1820143990 Phenylpropanoid HCT low borderline
BceiScaffold1890151080 Phenylpropanoid HCT medium pass
BceiScaffold210168870 Phenylpropanoid HCT low borderline
BceiScaffold2210190010 Phenylpropanoid HCT low borderline
BceiScaffold2210190320 Phenylpropanoid HCT low borderline
BceiScaffold2300205880 Phenylpropanoid HCT low borderline
BceiScaffold250224640 Phenylpropanoid HCT low borderline
BceiScaffold2580242470 Phenylpropanoid HCT low borderline
BceiScaffold3070287070 Phenylpropanoid HCT medium pass
BceiScaffold3600313630 Phenylpropanoid HCT low borderline
BceiScaffold360312660 Phenylpropanoid HCT low borderline
BceiScaffold3850327140 Phenylpropanoid HCT low borderline
BceiScaffold3990331720 Phenylpropanoid HCT low borderline
BceiScaffold4010345660 Phenylpropanoid HCT low borderline
BceiScaffold4010345680 Phenylpropanoid HCT low borderline
BceiScaffold4010345690 Phenylpropanoid HCT low borderline
BceiScaffold40332110 Phenylpropanoid HCT low borderline