PlantSME Plant secondary metabolism enzyme database

Bombax ceiba (bombax_ceiba)

Imported from atlas release summary for Bombax ceiba.

2549
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 774 21 BAHD (273) View species results
Phenylpropanoid pathway 551 11 POD (204) View species results
Alkaloid pathway 541 24 7DLGT (105) View species results
Flavonoid pathway 313 13 UFGT (186) View species results
Rosmarinic acid pathway 212 7 C4H (83) View species results
Steroid pathway 158 12 CAS (71) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2500 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 459 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: GS
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Gene Pathway Family Confidence Status
BceiScaffold1060023460 Alkaloid GS high pass
BceiScaffold110033780 Alkaloid GS low borderline
BceiScaffold1120040080 Alkaloid GS low borderline
BceiScaffold1130041730 Alkaloid GS low borderline
BceiScaffold1250062990 Alkaloid GS low borderline
BceiScaffold1270068330 Alkaloid GS high pass
BceiScaffold1270068340 Alkaloid GS high pass
BceiScaffold14070089290 Alkaloid GS high pass
BceiScaffold1420091940 Alkaloid GS low borderline
BceiScaffold1420091950 Alkaloid GS low borderline
BceiScaffold1420091960 Alkaloid GS low borderline
BceiScaffold1560113290 Alkaloid GS low borderline
BceiScaffold1680128730 Alkaloid GS low borderline
BceiScaffold1740137720 Alkaloid GS low borderline
BceiScaffold1740137730 Alkaloid GS low borderline
BceiScaffold1890151760 Alkaloid GS low borderline
BceiScaffold2200185040 Alkaloid GS high pass
BceiScaffold2220190730 Alkaloid GS high pass
BceiScaffold24090214750 Alkaloid GS medium pass
BceiScaffold24700222180 Alkaloid GS low borderline
BceiScaffold24970224310 Alkaloid GS low borderline
BceiScaffold250225960 Alkaloid GS low borderline
BceiScaffold2930271190 Alkaloid GS high pass
BceiScaffold3240295640 Alkaloid GS low borderline
BceiScaffold3240295650 Alkaloid GS low borderline
BceiScaffold4010344570 Alkaloid GS low borderline
BceiScaffold40332630 Alkaloid GS high pass
BceiScaffold410349000 Alkaloid GS high pass
BceiScaffold410349010 Alkaloid GS high pass
BceiScaffold410349020 Alkaloid GS high pass
BceiScaffold4120351060 Alkaloid GS low borderline
BceiScaffold430361630 Alkaloid GS medium pass
BceiScaffold4310365250 Alkaloid GS low borderline
BceiScaffold600432170 Alkaloid GS medium pass
BceiScaffold600432180 Alkaloid GS high pass
BceiScaffold600432190 Alkaloid GS high pass
BceiScaffold600432200 Alkaloid GS high pass
BceiScaffold600433640 Alkaloid GS high pass
BceiScaffold640448750 Alkaloid GS medium pass
BceiScaffold720469850 Alkaloid GS high pass
BceiScaffold720469900 Alkaloid GS high pass
BceiScaffold790488430 Alkaloid GS low borderline
BceiScaffold80501750 Alkaloid GS low borderline
BceiScaffold890512040 Alkaloid GS high pass