PlantSME Plant secondary metabolism enzyme database

Bombax ceiba (bombax_ceiba)

Imported from atlas release summary for Bombax ceiba.

2549
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 774 21 BAHD (273) View species results
Phenylpropanoid pathway 551 11 POD (204) View species results
Alkaloid pathway 541 24 7DLGT (105) View species results
Flavonoid pathway 313 13 UFGT (186) View species results
Rosmarinic acid pathway 212 7 C4H (83) View species results
Steroid pathway 158 12 CAS (71) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2500 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 459 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: LAC
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Gene Pathway Family Confidence Status
BceiScaffold100005430 Phenylpropanoid LAC medium pass
BceiScaffold100005540 Phenylpropanoid LAC medium pass
BceiScaffold100005550 Phenylpropanoid LAC medium pass
BceiScaffold1160048970 Phenylpropanoid LAC medium pass
BceiScaffold1160049660 Phenylpropanoid LAC medium pass
BceiScaffold1160049670 Phenylpropanoid LAC medium pass
BceiScaffold1160049900 Phenylpropanoid LAC medium pass
BceiScaffold1160049910 Phenylpropanoid LAC medium pass
BceiScaffold1270069030 Phenylpropanoid LAC medium pass
BceiScaffold1270069050 Phenylpropanoid LAC medium pass
BceiScaffold13040071830 Phenylpropanoid LAC medium pass
BceiScaffold1320072960 Phenylpropanoid LAC medium pass
BceiScaffold1320073940 Phenylpropanoid LAC medium pass
BceiScaffold1450096020 Phenylpropanoid LAC medium pass
BceiScaffold1450096800 Phenylpropanoid LAC medium pass
BceiScaffold1450096810 Phenylpropanoid LAC medium pass
BceiScaffold1450097010 Phenylpropanoid LAC medium pass
BceiScaffold1450097020 Phenylpropanoid LAC medium pass
BceiScaffold1470101360 Phenylpropanoid LAC medium pass
BceiScaffold1580114470 Phenylpropanoid LAC low borderline
BceiScaffold1810143190 Phenylpropanoid LAC medium pass
BceiScaffold1810143220 Phenylpropanoid LAC medium pass
BceiScaffold1810143480 Phenylpropanoid LAC medium pass
BceiScaffold19150153920 Phenylpropanoid LAC medium pass
BceiScaffold1960157500 Phenylpropanoid LAC medium pass
BceiScaffold200161800 Phenylpropanoid LAC low borderline
BceiScaffold200161830 Phenylpropanoid LAC low borderline
BceiScaffold20390164480 Phenylpropanoid LAC low borderline
BceiScaffold20390164490 Phenylpropanoid LAC low borderline
BceiScaffold2230192460 Phenylpropanoid LAC medium pass
BceiScaffold2230192470 Phenylpropanoid LAC medium pass
BceiScaffold2230192520 Phenylpropanoid LAC medium pass
BceiScaffold2230193860 Phenylpropanoid LAC medium pass
BceiScaffold230202800 Phenylpropanoid LAC low borderline
BceiScaffold250224760 Phenylpropanoid LAC medium pass
BceiScaffold250226130 Phenylpropanoid LAC medium pass
BceiScaffold250227100 Phenylpropanoid LAC medium pass
BceiScaffold250227730 Phenylpropanoid LAC medium pass
BceiScaffold250232120 Phenylpropanoid LAC low borderline
BceiScaffold2580241420 Phenylpropanoid LAC medium pass
BceiScaffold3210294240 Phenylpropanoid LAC medium pass
BceiScaffold360312180 Phenylpropanoid LAC medium pass
BceiScaffold360312200 Phenylpropanoid LAC medium pass
BceiScaffold360312460 Phenylpropanoid LAC medium pass
BceiScaffold360312470 Phenylpropanoid LAC medium pass
BceiScaffold360312640 Phenylpropanoid LAC medium pass
BceiScaffold3640317760 Phenylpropanoid LAC medium pass
BceiScaffold3920329300 Phenylpropanoid LAC low borderline
BceiScaffold40332910 Phenylpropanoid LAC low borderline
BceiScaffold40340090 Phenylpropanoid LAC low borderline