PlantSME Plant secondary metabolism enzyme database

Bombax ceiba (bombax_ceiba)

Imported from atlas release summary for Bombax ceiba.

2549
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 774 21 BAHD (273) View species results
Phenylpropanoid pathway 551 11 POD (204) View species results
Alkaloid pathway 541 24 7DLGT (105) View species results
Flavonoid pathway 313 13 UFGT (186) View species results
Rosmarinic acid pathway 212 7 C4H (83) View species results
Steroid pathway 158 12 CAS (71) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2500 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 459 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: LAMT
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Gene Pathway Family Confidence Status
BceiScaffold1010008340 Alkaloid LAMT medium borderline
BceiScaffold1010008350 Alkaloid LAMT medium borderline
BceiScaffold1010008360 Alkaloid LAMT medium borderline
BceiScaffold1010008370 Alkaloid LAMT medium borderline
BceiScaffold1060024730 Alkaloid LAMT medium borderline
BceiScaffold1120040220 Alkaloid LAMT medium borderline
BceiScaffold1270065580 Alkaloid LAMT medium borderline
BceiScaffold1270065590 Alkaloid LAMT medium borderline
BceiScaffold1320073730 Alkaloid LAMT medium borderline
BceiScaffold1360079730 Alkaloid LAMT low borderline
BceiScaffold1360079740 Alkaloid LAMT medium pass
BceiScaffold1560110220 Alkaloid LAMT medium borderline
BceiScaffold15630113410 Alkaloid LAMT medium borderline
BceiScaffold1870147500 Alkaloid LAMT medium borderline
BceiScaffold1890151020 Alkaloid LAMT medium borderline
BceiScaffold200162050 Alkaloid LAMT medium borderline
BceiScaffold25330236710 Alkaloid LAMT medium borderline
BceiScaffold25330236720 Alkaloid LAMT medium pass
BceiScaffold25330236730 Alkaloid LAMT medium borderline
BceiScaffold2950272750 Alkaloid LAMT medium borderline
BceiScaffold40333730 Alkaloid LAMT medium borderline
BceiScaffold4310365040 Alkaloid LAMT medium borderline
BceiScaffold4310365050 Alkaloid LAMT medium borderline
BceiScaffold4540373100 Alkaloid LAMT medium borderline
BceiScaffold480384460 Alkaloid LAMT medium pass
BceiScaffold480384470 Alkaloid LAMT medium borderline
BceiScaffold600435810 Alkaloid LAMT medium borderline
BceiScaffold600436690 Alkaloid LAMT medium borderline