PlantSME Plant secondary metabolism enzyme database

Bombax ceiba (bombax_ceiba)

Imported from atlas release summary for Bombax ceiba.

2549
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 774 21 BAHD (273) View species results
Phenylpropanoid pathway 551 11 POD (204) View species results
Alkaloid pathway 541 24 7DLGT (105) View species results
Flavonoid pathway 313 13 UFGT (186) View species results
Rosmarinic acid pathway 212 7 C4H (83) View species results
Steroid pathway 158 12 CAS (71) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2500 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 459 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: PAL
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Gene Pathway Family Confidence Status Best Target
BceiScaffold1400085660 Flavonoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
BceiScaffold1400085690 Flavonoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
BceiScaffold1400085700 Flavonoid PAL high pass PAL__00002__sp_P35510_PAL1_ARATH
BceiScaffold1400085730 Flavonoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
BceiScaffold1470100970 Flavonoid PAL medium pass PAL__00001__sp_P24481_PAL1_PETCR
BceiScaffold1530105670 Flavonoid PAL high pass PAL__00002__sp_P35510_PAL1_ARATH
BceiScaffold1810142650 Flavonoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
BceiScaffold360311210 Flavonoid PAL high pass PAL__00002__sp_P35510_PAL1_ARATH
BceiScaffold360311220 Flavonoid PAL medium pass PAL__00005__sp_Q50EX7_PAL1_PETHY
BceiScaffold4230358390 Flavonoid PAL high pass PAL__00003__sp_P45724_PAL2_ARATH
BceiScaffold4230358400 Flavonoid PAL medium pass PAL__00005__sp_Q50EX7_PAL1_PETHY
BceiScaffold4230358420 Flavonoid PAL high pass PAL__00002__sp_P35510_PAL1_ARATH
BceiScaffold4290361150 Flavonoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
BceiScaffold5000399710 Flavonoid PAL high pass PAL__00003__sp_P45724_PAL2_ARATH
BceiScaffold5000399720 Flavonoid PAL medium pass PAL__00005__sp_Q50EX7_PAL1_PETHY
BceiScaffold740478630 Flavonoid PAL high pass PAL__00003__sp_P45724_PAL2_ARATH
BceiScaffold1400085660 Phenylpropanoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
BceiScaffold1400085690 Phenylpropanoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
BceiScaffold1400085700 Phenylpropanoid PAL high pass PAL__00002__sp_P35510_PAL1_ARATH
BceiScaffold1400085730 Phenylpropanoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
BceiScaffold1470100970 Phenylpropanoid PAL medium pass PAL__00001__sp_P24481_PAL1_PETCR
BceiScaffold1530105670 Phenylpropanoid PAL high pass PAL__00002__sp_P35510_PAL1_ARATH
BceiScaffold1810142650 Phenylpropanoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
BceiScaffold360311210 Phenylpropanoid PAL high pass PAL__00002__sp_P35510_PAL1_ARATH
BceiScaffold360311220 Phenylpropanoid PAL medium pass PAL__00005__sp_Q50EX7_PAL1_PETHY
BceiScaffold4230358390 Phenylpropanoid PAL high pass PAL__00003__sp_P45724_PAL2_ARATH
BceiScaffold4230358400 Phenylpropanoid PAL medium pass PAL__00005__sp_Q50EX7_PAL1_PETHY
BceiScaffold4230358420 Phenylpropanoid PAL high pass PAL__00002__sp_P35510_PAL1_ARATH
BceiScaffold4290361150 Phenylpropanoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
BceiScaffold5000399710 Phenylpropanoid PAL high pass PAL__00003__sp_P45724_PAL2_ARATH
BceiScaffold5000399720 Phenylpropanoid PAL medium pass PAL__00005__sp_Q50EX7_PAL1_PETHY
BceiScaffold740478630 Phenylpropanoid PAL high pass PAL__00003__sp_P45724_PAL2_ARATH
BceiScaffold1400085660 Rosmarinic Acid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
BceiScaffold1400085690 Rosmarinic Acid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
BceiScaffold1400085700 Rosmarinic Acid PAL high pass PAL__00002__sp_P35510_PAL1_ARATH
BceiScaffold1400085730 Rosmarinic Acid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
BceiScaffold1470100970 Rosmarinic Acid PAL medium pass PAL__00001__sp_P24481_PAL1_PETCR
BceiScaffold1530105670 Rosmarinic Acid PAL high pass PAL__00002__sp_P35510_PAL1_ARATH
BceiScaffold1810142650 Rosmarinic Acid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
BceiScaffold360311210 Rosmarinic Acid PAL high pass PAL__00002__sp_P35510_PAL1_ARATH
BceiScaffold360311220 Rosmarinic Acid PAL medium pass PAL__00005__sp_Q50EX7_PAL1_PETHY
BceiScaffold4230358390 Rosmarinic Acid PAL high pass PAL__00003__sp_P45724_PAL2_ARATH
BceiScaffold4230358400 Rosmarinic Acid PAL medium pass PAL__00005__sp_Q50EX7_PAL1_PETHY
BceiScaffold4230358420 Rosmarinic Acid PAL high pass PAL__00002__sp_P35510_PAL1_ARATH
BceiScaffold4290361150 Rosmarinic Acid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
BceiScaffold5000399710 Rosmarinic Acid PAL high pass PAL__00003__sp_P45724_PAL2_ARATH
BceiScaffold5000399720 Rosmarinic Acid PAL medium pass PAL__00005__sp_Q50EX7_PAL1_PETHY
BceiScaffold740478630 Rosmarinic Acid PAL high pass PAL__00003__sp_P45724_PAL2_ARATH