PlantSME Plant secondary metabolism enzyme database

Bombax ceiba (bombax_ceiba)

Imported from atlas release summary for Bombax ceiba.

2549
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 774 21 BAHD (273) View species results
Phenylpropanoid pathway 551 11 POD (204) View species results
Alkaloid pathway 541 24 7DLGT (105) View species results
Flavonoid pathway 313 13 UFGT (186) View species results
Rosmarinic acid pathway 212 7 C4H (83) View species results
Steroid pathway 158 12 CAS (71) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2500 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 459 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: PMT
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Gene Pathway Family Confidence Status
BceiScaffold10000530 Alkaloid PMT medium pass
BceiScaffold1120041340 Alkaloid PMT low borderline
BceiScaffold1140043650 Alkaloid PMT medium pass
BceiScaffold1140046160 Alkaloid PMT low borderline
BceiScaffold1210056570 Alkaloid PMT low borderline
BceiScaffold1320073170 Alkaloid PMT low borderline
BceiScaffold1420090670 Alkaloid PMT low borderline
BceiScaffold160114840 Alkaloid PMT medium borderline
BceiScaffold1670120240 Alkaloid PMT low borderline
BceiScaffold1670120260 Alkaloid PMT low borderline
BceiScaffold1670120290 Alkaloid PMT medium pass
BceiScaffold1680128000 Alkaloid PMT low borderline
BceiScaffold1730135560 Alkaloid PMT low borderline
BceiScaffold1730135600 Alkaloid PMT low borderline
BceiScaffold1730135610 Alkaloid PMT low borderline
BceiScaffold1730135630 Alkaloid PMT low borderline
BceiScaffold1730135660 Alkaloid PMT medium pass
BceiScaffold1730135670 Alkaloid PMT low borderline
BceiScaffold1740139040 Alkaloid PMT medium pass
BceiScaffold18710147730 Alkaloid PMT medium pass
BceiScaffold2200185910 Alkaloid PMT medium borderline
BceiScaffold2210190010 Alkaloid PMT low borderline
BceiScaffold250224640 Alkaloid PMT low borderline
BceiScaffold2580242470 Alkaloid PMT medium pass
BceiScaffold3050286700 Alkaloid PMT medium borderline
BceiScaffold3070287070 Alkaloid PMT low borderline
BceiScaffold4010344430 Alkaloid PMT medium borderline
BceiScaffold4120351880 Alkaloid PMT low borderline
BceiScaffold540417100 Alkaloid PMT medium pass
BceiScaffold640447490 Alkaloid PMT medium borderline
BceiScaffold740481180 Alkaloid PMT low borderline
BceiScaffold890510400 Alkaloid PMT medium borderline
BceiScaffold890516400 Alkaloid PMT low borderline
BceiScaffold9890526770 Alkaloid PMT low borderline