PlantSME Plant secondary metabolism enzyme database

Bombax ceiba (bombax_ceiba)

Imported from atlas release summary for Bombax ceiba.

2549
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 774 21 BAHD (273) View species results
Phenylpropanoid pathway 551 11 POD (204) View species results
Alkaloid pathway 541 24 7DLGT (105) View species results
Flavonoid pathway 313 13 UFGT (186) View species results
Rosmarinic acid pathway 212 7 C4H (83) View species results
Steroid pathway 158 12 CAS (71) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2500 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 459 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IO
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Gene Pathway Family Confidence Status
BceiScaffold1090030030 Alkaloid IO medium borderline
BceiScaffold1270066260 Alkaloid IO medium borderline
BceiScaffold1270066270 Alkaloid IO medium borderline
BceiScaffold1270066280 Alkaloid IO medium borderline
BceiScaffold1270069380 Alkaloid IO medium borderline
BceiScaffold1400086500 Alkaloid IO medium borderline
BceiScaffold1400086510 Alkaloid IO medium borderline
BceiScaffold1400086530 Alkaloid IO medium borderline
BceiScaffold14160090190 Alkaloid IO medium pass
BceiScaffold16480119370 Alkaloid IO low borderline
BceiScaffold1700132340 Alkaloid IO low borderline
BceiScaffold1930154920 Alkaloid IO medium borderline
BceiScaffold2020163740 Alkaloid IO medium borderline
BceiScaffold2020163760 Alkaloid IO medium borderline
BceiScaffold2020163770 Alkaloid IO medium borderline
BceiScaffold2230196150 Alkaloid IO medium borderline
BceiScaffold23870210900 Alkaloid IO medium borderline
BceiScaffold2420215110 Alkaloid IO medium borderline
BceiScaffold2460219270 Alkaloid IO low borderline
BceiScaffold25070233100 Alkaloid IO medium borderline
BceiScaffold2580241600 Alkaloid IO medium borderline
BceiScaffold2700256860 Alkaloid IO medium borderline
BceiScaffold2750259760 Alkaloid IO medium pass
BceiScaffold2830264200 Alkaloid IO medium borderline
BceiScaffold3200291050 Alkaloid IO medium borderline
BceiScaffold3240295580 Alkaloid IO medium borderline
BceiScaffold3240295620 Alkaloid IO medium borderline
BceiScaffold330299670 Alkaloid IO medium borderline
BceiScaffold360308640 Alkaloid IO medium borderline
BceiScaffold3640317890 Alkaloid IO medium borderline
BceiScaffold40334750 Alkaloid IO medium borderline
BceiScaffold40334770 Alkaloid IO medium borderline
BceiScaffold40334780 Alkaloid IO medium borderline
BceiScaffold4120353590 Alkaloid IO medium borderline
BceiScaffold430364030 Alkaloid IO low borderline
BceiScaffold4310364970 Alkaloid IO medium pass
BceiScaffold4500371590 Alkaloid IO medium borderline
BceiScaffold480385500 Alkaloid IO low borderline
BceiScaffold5000398880 Alkaloid IO medium borderline
BceiScaffold540415670 Alkaloid IO medium borderline
BceiScaffold5660418750 Alkaloid IO medium borderline
BceiScaffold590427260 Alkaloid IO medium borderline
BceiScaffold5980430780 Alkaloid IO low borderline
BceiScaffold600434840 Alkaloid IO medium borderline
BceiScaffold600435470 Alkaloid IO low borderline
BceiScaffold640443630 Alkaloid IO medium borderline
BceiScaffold710463750 Alkaloid IO low borderline
BceiScaffold90518970 Alkaloid IO medium borderline
BceiScaffold920521020 Alkaloid IO low borderline