PlantSME Plant secondary metabolism enzyme database

Bombax ceiba (bombax_ceiba)

Imported from atlas release summary for Bombax ceiba.

2549
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 774 21 BAHD (273) View species results
Phenylpropanoid pathway 551 11 POD (204) View species results
Alkaloid pathway 541 24 7DLGT (105) View species results
Flavonoid pathway 313 13 UFGT (186) View species results
Rosmarinic acid pathway 212 7 C4H (83) View species results
Steroid pathway 158 12 CAS (71) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2500 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 459 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
BceiScaffold1270065960 Alkaloid 7DLGT low borderline
BceiScaffold1270065970 Alkaloid 7DLGT medium pass
BceiScaffold1270066000 Alkaloid 7DLGT medium pass
BceiScaffold1270066010 Alkaloid 7DLGT medium pass
BceiScaffold12830070570 Alkaloid 7DLGT high pass
BceiScaffold1320074100 Alkaloid 7DLGT medium pass
BceiScaffold1320074110 Alkaloid 7DLGT high pass
BceiScaffold1320074120 Alkaloid 7DLGT medium pass
BceiScaffold1320074130 Alkaloid 7DLGT medium pass
BceiScaffold1320074140 Alkaloid 7DLGT low borderline
BceiScaffold1320074150 Alkaloid 7DLGT low borderline
BceiScaffold1320074160 Alkaloid 7DLGT high pass
BceiScaffold1320074170 Alkaloid 7DLGT medium pass
BceiScaffold1320074180 Alkaloid 7DLGT medium pass
BceiScaffold1400086200 Alkaloid 7DLGT medium pass
BceiScaffold1400086210 Alkaloid 7DLGT low borderline
BceiScaffold140084010 Alkaloid 7DLGT low borderline
BceiScaffold1450097880 Alkaloid 7DLGT high pass
BceiScaffold1450097930 Alkaloid 7DLGT high pass
BceiScaffold1450097940 Alkaloid 7DLGT high pass
BceiScaffold1450097970 Alkaloid 7DLGT high pass
BceiScaffold1470100530 Alkaloid 7DLGT low borderline
BceiScaffold1470100540 Alkaloid 7DLGT low borderline
BceiScaffold1470100550 Alkaloid 7DLGT low borderline
BceiScaffold1500103630 Alkaloid 7DLGT medium pass
BceiScaffold1500103690 Alkaloid 7DLGT medium pass
BceiScaffold15060104160 Alkaloid 7DLGT low borderline
BceiScaffold15060104170 Alkaloid 7DLGT low borderline
BceiScaffold15060104180 Alkaloid 7DLGT low borderline
BceiScaffold15060104190 Alkaloid 7DLGT low borderline
BceiScaffold1530107430 Alkaloid 7DLGT medium pass
BceiScaffold1530107440 Alkaloid 7DLGT high pass
BceiScaffold1560113240 Alkaloid 7DLGT low borderline
BceiScaffold1630117020 Alkaloid 7DLGT medium pass
BceiScaffold1680127030 Alkaloid 7DLGT low borderline
BceiScaffold1680127050 Alkaloid 7DLGT low borderline
BceiScaffold1690130380 Alkaloid 7DLGT low borderline
BceiScaffold1690130390 Alkaloid 7DLGT low borderline
BceiScaffold1690130400 Alkaloid 7DLGT low borderline
BceiScaffold1700133950 Alkaloid 7DLGT low borderline
BceiScaffold1700134050 Alkaloid 7DLGT low borderline
BceiScaffold1730135260 Alkaloid 7DLGT medium pass
BceiScaffold1740136390 Alkaloid 7DLGT medium pass
BceiScaffold1740136620 Alkaloid 7DLGT low borderline
BceiScaffold1740136630 Alkaloid 7DLGT low borderline
BceiScaffold1740136670 Alkaloid 7DLGT low borderline
BceiScaffold1740137810 Alkaloid 7DLGT medium pass
BceiScaffold1810142410 Alkaloid 7DLGT low borderline
BceiScaffold1820145010 Alkaloid 7DLGT low borderline
BceiScaffold1870147320 Alkaloid 7DLGT low borderline