PMK

Atlas summary family PMK.

Lineage Coverage

Detected in 734 of 789 public species; click a lineage to inspect its species list.

Algae

Species Distribution

Related Modules

Pathway Position Map

Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.

Curated order

Terpenoid pathway 1501 current-family members Bergman et al. 2024; Karunanithi & Zerbe 2019; Zhang et al. 2023; Lu et al. 2023; Moghe et al. 2023

MVA precursor branch

AACT 337 HMGS 2158 HMGR 3794 MVK 1409 PMK 1501 MVD 1588

MEP precursor branch

DXS 4421 DXR 1551 MCT/IspD 1192 CMK/IspE 1150 MDS/IspF 1197 HDS/IspG 1612 HDR/IspH 1720

IPP/DMAPP and prenyl diphosphate extension

IDI 1579 GPPS 135 FPPS 5839 GGPPS 100

Skeleton formation and tailoring

TPS 36208 CYP71 13248 CYP76 46690 UGT 123661 BAHD 149019

Family Gene List

Gene	Species	Protein ID
Ccusscaffold_90235010	calliergonella_cuspidata	Ccusscaffold_90235010
CpluGWHAMMO000003710157740.1	calohypnum_plumiforme	CpluGWHAMMO000003710157740.1
CpluGWHAMMO000005530209660.1	calohypnum_plumiforme	CpluGWHAMMO000005530209660.1
Cgigscaffold_260102350	calotropis_gigantea	Cgigscaffold_260102350
Cgigscaffold_70180760	calotropis_gigantea	Cgigscaffold_70180760
XP_010461017.1	camelina_sativa	XP_010461017.1
XP_010461018.1	camelina_sativa	XP_010461018.1
XP_010478612.1	camelina_sativa	XP_010478612.1
XP_010499741.1	camelina_sativa	XP_010499741.1
camellia_oleifera_maker-HiC_scaffold_14-snap-gene-1040.38-mRNA-1	camellia_oleifera	camellia_oleifera_maker-HiC_scaffold_14-snap-gene-1040.38-mRNA-1
camellia_sinensis_GWHPASIV016370	camellia_sinensis	camellia_sinensis_GWHPASIV016370
camellia_sinensis_GWHPASIV018983	camellia_sinensis	camellia_sinensis_GWHPASIV018983
camellia_sinensis_GWHPASIV037645	camellia_sinensis	camellia_sinensis_GWHPASIV037645
camellia_sinensis_GWHPASIV038424	camellia_sinensis	camellia_sinensis_GWHPASIV038424
camellia_sinensis_GWHPASIV041835	camellia_sinensis	camellia_sinensis_GWHPASIV041835
Cacu01G0007910.1	camptotheca_acuminata	Cacu01G0007910.1
Cacu01G0013640.1	camptotheca_acuminata	Cacu01G0013640.1
Cacu01G0013640.2	camptotheca_acuminata	Cacu01G0013640.2
Cacu05G0001380.1	camptotheca_acuminata	Cacu05G0001380.1
Cacu05G0001380.2	camptotheca_acuminata	Cacu05G0001380.2
Cacu05G0001380.3	camptotheca_acuminata	Cacu05G0001380.3
Cacu05G0001380.4	camptotheca_acuminata	Cacu05G0001380.4
Cacu08G0008500.1	camptotheca_acuminata	Cacu08G0008500.1
capparis_spinosa_Cs16G001080.1	capparis_spinosa	capparis_spinosa_Cs16G001080.1
capparis_spinosa_Cs17G004210.1	capparis_spinosa	capparis_spinosa_Cs17G004210.1
CAgraScaffold15080040790.1	capsella_grandiflora	CAgraScaffold15080040790.1
Crubscaffold_10030230.1	capsella_rubella	Crubscaffold_10030230.1
Cann01G0009560.1	capsicum_annuum	Cann01G0009560.1
Cann01G0030000.1	capsicum_annuum	Cann01G0030000.1
Cann06G0014450.1	capsicum_annuum	Cann06G0014450.1