PlantSME Plant secondary metabolism enzyme database
PMK

PMK

Atlas summary family PMK.

Lineage Coverage
Detected in 734 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Humulus lupulus
Arachis hypogaea
Arachis monticola
Panax quinquefolius
Related Modules
Terpenoid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Terpenoid pathway 1501 current-family members Bergman et al. 2024; Karunanithi & Zerbe 2019; Zhang et al. 2023; Lu et al. 2023; Moghe et al. 2023
MVA precursor branch
AACT 337 HMGS 2158 HMGR 3794 MVK 1409 PMK 1501 MVD 1588
MEP precursor branch
DXS 4421 DXR 1551 MCT/IspD 1192 CMK/IspE 1150 MDS/IspF 1197 HDS/IspG 1612 HDR/IspH 1720
IPP/DMAPP and prenyl diphosphate extension
IDI 1579 GPPS 135 FPPS 5839 GGPPS 100
Skeleton formation and tailoring
TPS 36208 CYP71 13248 CYP76 46690 UGT 123661 BAHD 149019
Family Gene List
GeneSpeciesProtein ID
Egra09G0014600.1 eucalyptus_grandis Egra09G0014600.1
Egra09G0014600.3 eucalyptus_grandis Egra09G0014600.3
EulmGWHAAAL000288980265440.1 eucommia_ulmoides EulmGWHAAAL000288980265440.1
euphorbia_peplus_WCJ21736.1 euphorbia_peplus euphorbia_peplus_WCJ21736.1
Esalscaffold_130079960.1 eutrema_salsugineum Esalscaffold_130079960.1
Esalscaffold_50178210.1 eutrema_salsugineum Esalscaffold_50178210.1
FtPinG0004430700.01.T01 fagopyrum_tataricum FtPinG0004430700.01.T01
Falbscaffold2459_cov1880119500 faidherbia_albida Falbscaffold2459_cov1880119500
Falbscaffold2577_cov1980124930 faidherbia_albida Falbscaffold2577_cov1980124930
Falbscaffold341_cov1970154210 faidherbia_albida Falbscaffold341_cov1970154210
Falbscaffold80894_cov1940244700 faidherbia_albida Falbscaffold80894_cov1940244700
Fjavscaffold_180084250 fissidens_javanicus Fjavscaffold_180084250
Fant1729180044380.1 fontinalis_antipyretica Fant1729180044380.1
fortunella_hindsii_sjg255680.1 fortunella_hindsii fortunella_hindsii_sjg255680.1
fortunella_hindsii_sjg306920.1 fortunella_hindsii fortunella_hindsii_sjg306920.1
Fossombronia9890409690 fossombronia Fossombronia9890409690
FanaFAN_r2.3ch3Bib0759680 fragaria_ananassa FanaFAN_r2.3ch3Bib0759680
FanaFAN_r2.3ch5Ava1057130 fragaria_ananassa FanaFAN_r2.3ch5Ava1057130
FanaFAN_r2.3ch5Ava1062750 fragaria_ananassa FanaFAN_r2.3ch5Ava1062750
FanaFAN_r2.3ch5Avb1102140 fragaria_ananassa FanaFAN_r2.3ch5Avb1102140
FanaFAN_r2.3ch5Avb1107810 fragaria_ananassa FanaFAN_r2.3ch5Avb1107810
FanaFAN_r2.3ch5Bia1141760 fragaria_ananassa FanaFAN_r2.3ch5Bia1141760
FanaFAN_r2.3ch5Bib1168840 fragaria_ananassa FanaFAN_r2.3ch5Bib1168840
FanaFAN_r2.3ch5X1a1189410 fragaria_ananassa FanaFAN_r2.3ch5X1a1189410
FanaFAN_r2.3ch5X1b1214060 fragaria_ananassa FanaFAN_r2.3ch5X1b1214060
FanaFAN_r2.3ch6X1a1416490 fragaria_ananassa FanaFAN_r2.3ch6X1a1416490
fragaria_chiloensis_augustus_masked-3A-processed-gene-127.80-mRNA-1 fragaria_chiloensis fragaria_chiloensis_augustus_masked-3A-processed-gene-127.80-mRNA-1
fragaria_chiloensis_augustus_masked-5A-processed-gene-104.16-mRNA-1 fragaria_chiloensis fragaria_chiloensis_augustus_masked-5A-processed-gene-104.16-mRNA-1
fragaria_chiloensis_maker-3B-augustus-gene-176.15-mRNA-1 fragaria_chiloensis fragaria_chiloensis_maker-3B-augustus-gene-176.15-mRNA-1
fragaria_chiloensis_maker-3C-augustus-gene-200.63-mRNA-1 fragaria_chiloensis fragaria_chiloensis_maker-3C-augustus-gene-200.63-mRNA-1