PMK

Atlas summary family PMK.

Lineage Coverage

Detected in 734 of 789 public species; click a lineage to inspect its species list.

Algae

Species Distribution

Related Modules

Pathway Position Map

Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.

Curated order

Terpenoid pathway 1501 current-family members Bergman et al. 2024; Karunanithi & Zerbe 2019; Zhang et al. 2023; Lu et al. 2023; Moghe et al. 2023

MVA precursor branch

AACT 337 HMGS 2158 HMGR 3794 MVK 1409 PMK 1501 MVD 1588

MEP precursor branch

DXS 4421 DXR 1551 MCT/IspD 1192 CMK/IspE 1150 MDS/IspF 1197 HDS/IspG 1612 HDR/IspH 1720

IPP/DMAPP and prenyl diphosphate extension

IDI 1579 GPPS 135 FPPS 5839 GGPPS 100

Skeleton formation and tailoring

TPS 36208 CYP71 13248 CYP76 46690 UGT 123661 BAHD 149019

Family Gene List

Gene	Species	Protein ID
nicotiana_benthamiana_Niben261Chr07g0989012.1	nicotiana_benthamiana	nicotiana_benthamiana_Niben261Chr07g0989012.1
nicotiana_benthamiana_Niben261Chr13g0911021.1	nicotiana_benthamiana	nicotiana_benthamiana_Niben261Chr13g0911021.1
nicotiana_sylvestris_XP_009765396.1	nicotiana_sylvestris	nicotiana_sylvestris_XP_009765396.1
nicotiana_sylvestris_XP_009765397.1	nicotiana_sylvestris	nicotiana_sylvestris_XP_009765397.1
nicotiana_sylvestris_XP_009779121.1	nicotiana_sylvestris	nicotiana_sylvestris_XP_009779121.1
nicotiana_sylvestris_XP_009797212.1	nicotiana_sylvestris	nicotiana_sylvestris_XP_009797212.1
nicotiana_tabacum_Nitab4.5_0000308g0200.1	nicotiana_tabacum	nicotiana_tabacum_Nitab4.5_0000308g0200.1
nicotiana_tabacum_Nitab4.5_0001267g0050.1	nicotiana_tabacum	nicotiana_tabacum_Nitab4.5_0001267g0050.1
nicotiana_tabacum_Nitab4.5_0002346g0010.1	nicotiana_tabacum	nicotiana_tabacum_Nitab4.5_0002346g0010.1
nicotiana_tabacum_Nitab4.5_0002429g0030.1	nicotiana_tabacum	nicotiana_tabacum_Nitab4.5_0002429g0030.1
nicotiana_tabacum_Nitab4.5_0002897g0020.1	nicotiana_tabacum	nicotiana_tabacum_Nitab4.5_0002897g0020.1
nicotiana_tabacum_Nitab4.5_0002897g0030.1	nicotiana_tabacum	nicotiana_tabacum_Nitab4.5_0002897g0030.1
nicotiana_tabacum_Nitab4.5_0011549g0010.1	nicotiana_tabacum	nicotiana_tabacum_Nitab4.5_0011549g0010.1
nicotiana_tabacum_Nitab4.5_0011729g0040.1	nicotiana_tabacum	nicotiana_tabacum_Nitab4.5_0011729g0040.1
nicotiana_tabacum_Nitab4.5_0028488g0010.1	nicotiana_tabacum	nicotiana_tabacum_Nitab4.5_0028488g0010.1
nicotiana_tomentosiformis_XP_009609764.1	nicotiana_tomentosiformis	nicotiana_tomentosiformis_XP_009609764.1
nicotiana_tomentosiformis_XP_009611470.1	nicotiana_tomentosiformis	nicotiana_tomentosiformis_XP_009611470.1
nicotiana_tomentosiformis_XP_018629238.1	nicotiana_tomentosiformis	nicotiana_tomentosiformis_XP_018629238.1
nicotiana_tomentosiformis_XP_018629239.1	nicotiana_tomentosiformis	nicotiana_tomentosiformis_XP_018629239.1
nicotiana_tomentosiformis_XP_033517322.1	nicotiana_tomentosiformis	nicotiana_tomentosiformis_XP_033517322.1
Nschscaffold2853_cov1140149260	nissolia_schottii	Nschscaffold2853_cov1140149260
Ncon15906070248530	noteroclada_confluens	Ncon15906070248530
Ncon17092150487210	noteroclada_confluens	Ncon17092150487210
Ncon17105730494880	noteroclada_confluens	Ncon17105730494880
NcolGWHAAYW000000120208530.1	nymphaea_colorata	NcolGWHAAYW000000120208530.1
NcolGWHAAYW000000120208530.2	nymphaea_colorata	NcolGWHAAYW000000120208530.2
nyssa_yunnanensis_augustus-291030-processed-gene-0.2-mRNA-1	nyssa_yunnanensis	nyssa_yunnanensis_augustus-291030-processed-gene-0.2-mRNA-1
nyssa_yunnanensis_augustus-291654-processed-gene-41.0-mRNA-1	nyssa_yunnanensis	nyssa_yunnanensis_augustus-291654-processed-gene-41.0-mRNA-1
nyssa_yunnanensis_maker-291030-augustus-gene-0.9-mRNA-1	nyssa_yunnanensis	nyssa_yunnanensis_maker-291030-augustus-gene-0.9-mRNA-1
ochroma_pyramidale_OCHPYR02214_OCHPYR	ochroma_pyramidale	ochroma_pyramidale_OCHPYR02214_OCHPYR