PMK

Atlas summary family PMK.

Lineage Coverage

Detected in 734 of 789 public species; click a lineage to inspect its species list.

Algae

Species Distribution

Related Modules

Pathway Position Map

Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.

Curated order

Terpenoid pathway 1501 current-family members Bergman et al. 2024; Karunanithi & Zerbe 2019; Zhang et al. 2023; Lu et al. 2023; Moghe et al. 2023

MVA precursor branch

AACT 337 HMGS 2158 HMGR 3794 MVK 1409 PMK 1501 MVD 1588

MEP precursor branch

DXS 4421 DXR 1551 MCT/IspD 1192 CMK/IspE 1150 MDS/IspF 1197 HDS/IspG 1612 HDR/IspH 1720

IPP/DMAPP and prenyl diphosphate extension

IDI 1579 GPPS 135 FPPS 5839 GGPPS 100

Skeleton formation and tailoring

TPS 36208 CYP71 13248 CYP76 46690 UGT 123661 BAHD 149019

Family Gene List

Gene	Species	Protein ID
ochroma_pyramidale_OCHPYR05471_OCHPYR	ochroma_pyramidale	ochroma_pyramidale_OCHPYR05471_OCHPYR
ochroma_pyramidale_OCHPYR10300_OCHPYR	ochroma_pyramidale	ochroma_pyramidale_OCHPYR10300_OCHPYR
ocimum_basilicum_382166.g4.t1	ocimum_basilicum	ocimum_basilicum_382166.g4.t1
ocimum_basilicum_382417.g2.t1	ocimum_basilicum	ocimum_basilicum_382417.g2.t1
ocimum_basilicum_751.g126.t1	ocimum_basilicum	ocimum_basilicum_751.g126.t1
ocimum_sanctum_Ote100128640031	ocimum_sanctum	ocimum_sanctum_Ote100128640031
ocimum_sanctum_Ote100255000021	ocimum_sanctum	ocimum_sanctum_Ote100255000021
Osph4598570046820	odontoschisma_sphagni	Osph4598570046820
Osph4822370080740	odontoschisma_sphagni	Osph4822370080740
Osph4956780179020	odontoschisma_sphagni	Osph4956780179020
oldenlandia_corymbosa_CAI9105235.1	oldenlandia_corymbosa	oldenlandia_corymbosa_CAI9105235.1
oldenlandia_corymbosa_CAI9111136.1	oldenlandia_corymbosa	oldenlandia_corymbosa_CAI9111136.1
Oeur13G0004160.1	olea_europaea	Oeur13G0004160.1
Oeurscaffold2560098230.1	olea_europaea	Oeurscaffold2560098230.1
Oeurscaffold25860099720.1	olea_europaea	Oeurscaffold25860099720.1
Olatscaffold630307690	olyra_latifolia	Olatscaffold630307690
Opum07G0001260.1	ophiorrhiza_pumila	Opum07G0001260.1
Opum08G0019220.1	ophiorrhiza_pumila	Opum08G0019220.1
origanum_vulgare_119106.g6.t1	origanum_vulgare	origanum_vulgare_119106.g6.t1
origanum_vulgare_700.g16.t1	origanum_vulgare	origanum_vulgare_700.g16.t1
Oropetium_20150105_00718A	oropetium_thomaeum	Oropetium_20150105_00718A
Oropetium_20150105_17354A	oropetium_thomaeum	Oropetium_20150105_17354A
orthotrichum_anomalum_jg18053.t1	orthotrichum_anomalum	orthotrichum_anomalum_jg18053.t1
orthotrichum_anomalum_jg2634.t1	orthotrichum_anomalum	orthotrichum_anomalum_jg2634.t1
OBART03G10870.1	oryza_barthii	OBART03G10870.1
OBART03G10870.2	oryza_barthii	OBART03G10870.2
OBART03G30040.1	oryza_barthii	OBART03G30040.1
OB03G21020.1	oryza_brachyantha	OB03G21020.1
OB11G18280.1	oryza_brachyantha	OB11G18280.1
oryza_coarctata_PC_24183	oryza_coarctata	oryza_coarctata_PC_24183