PMK

Atlas summary family PMK.

Lineage Coverage

Detected in 734 of 789 public species; click a lineage to inspect its species list.

Algae

Species Distribution

Related Modules

Pathway Position Map

Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.

Curated order

Terpenoid pathway 1501 current-family members Bergman et al. 2024; Karunanithi & Zerbe 2019; Zhang et al. 2023; Lu et al. 2023; Moghe et al. 2023

MVA precursor branch

AACT 337 HMGS 2158 HMGR 3794 MVK 1409 PMK 1501 MVD 1588

MEP precursor branch

DXS 4421 DXR 1551 MCT/IspD 1192 CMK/IspE 1150 MDS/IspF 1197 HDS/IspG 1612 HDR/IspH 1720

IPP/DMAPP and prenyl diphosphate extension

IDI 1579 GPPS 135 FPPS 5839 GGPPS 100

Skeleton formation and tailoring

TPS 36208 CYP71 13248 CYP76 46690 UGT 123661 BAHD 149019

Family Gene List

Gene	Species	Protein ID
oryza_coarctata_PC_36267	oryza_coarctata	oryza_coarctata_PC_36267
oryza_coarctata_PC_43338	oryza_coarctata	oryza_coarctata_PC_43338
oryza_coarctata_PC_47517	oryza_coarctata	oryza_coarctata_PC_47517
ORGLA03G0104400.1	oryza_glaberrima	ORGLA03G0104400.1
Oglu03G0010620.1	oryza_glumaepatula	Oglu03G0010620.1
Oglu03G0029910.1	oryza_glumaepatula	Oglu03G0029910.1
Oglu03G0029910.2	oryza_glumaepatula	Oglu03G0029910.2
Oglu06G0028890.1	oryza_glumaepatula	Oglu06G0028890.1
oryza_glumipatula_OGLUM03G10750.1	oryza_glumipatula	oryza_glumipatula_OGLUM03G10750.1
oryza_glumipatula_OGLUM03G30280.1	oryza_glumipatula	oryza_glumipatula_OGLUM03G30280.1
oryza_glumipatula_OGLUM06G29300.1	oryza_glumipatula	oryza_glumipatula_OGLUM06G29300.1
KAF0902166.1	oryza_granulata	KAF0902166.1
KAF0910589.1	oryza_granulata	KAF0910589.1
KN539284.1_FGP006	oryza_longistaminata	KN539284.1_FGP006
OMERI03G26290.2	oryza_meridionalis	OMERI03G26290.2
ONIVA03G11450.1	oryza_nivara	ONIVA03G11450.1
ONIVA03G31300.1	oryza_nivara	ONIVA03G31300.1
ONIVA03G31300.2	oryza_nivara	ONIVA03G31300.2
OoffiChr03g01029.1	oryza_officinalis	OoffiChr03g01029.1
OoffiChr03g01029.2	oryza_officinalis	OoffiChr03g01029.2
OoffiChr03g02534.1	oryza_officinalis	OoffiChr03g02534.1
OoffiChr06g02478.2	oryza_officinalis	OoffiChr06g02478.2
OPUNC02G32400.1	oryza_punctata	OPUNC02G32400.1
OPUNC03G10460.1	oryza_punctata	OPUNC03G10460.1
OPUNC03G10460.2	oryza_punctata	OPUNC03G10460.2
OPUNC03G10460.3	oryza_punctata	OPUNC03G10460.3
OPUNC03G10460.4	oryza_punctata	OPUNC03G10460.4
Orhiscaffold18560071500.1	oryza_rhizomatis	Orhiscaffold18560071500.1
Orhiscaffold40000185220.1	oryza_rhizomatis	Orhiscaffold40000185220.1
Oruf03G0011060.1	oryza_rufipogon	Oruf03G0011060.1