PlantSME Plant secondary metabolism enzyme database

Oryza longistaminata (oryza_longistaminata)

Imported from atlas release summary for Oryza longistaminata.

1740
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 461 19 BAHD (151) View species results
Alkaloid pathway 386 24 7DLGT (74) View species results
Phenylpropanoid pathway 383 13 POD (164) View species results
Flavonoid pathway 221 13 UFGT (108) View species results
Rosmarinic acid pathway 180 7 C4H (110) View species results
Steroid pathway 109 14 SMT1/SMT2/SMT3 (45) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1898 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 267 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
AMDW01023985.1_FGP001 Alkaloid 16OMT medium borderline
KN538681.1_FGP104 Alkaloid 16OMT medium borderline
KN538707.1_FGP023 Alkaloid 16OMT medium borderline
KN538770.1_FGP029 Alkaloid 16OMT medium borderline
KN538770.1_FGP036 Alkaloid 16OMT low borderline
KN538824.1_FGP013 Alkaloid 16OMT medium borderline
KN538936.1_FGP004 Alkaloid 16OMT medium borderline
KN539004.1_FGP002 Alkaloid 16OMT medium borderline
KN539036.1_FGP007 Alkaloid 16OMT medium borderline
KN539099.1_FGP008 Alkaloid 16OMT medium borderline
KN539250.1_FGP001 Alkaloid 16OMT medium borderline
KN539250.1_FGP004 Alkaloid 16OMT medium borderline
KN539250.1_FGP005 Alkaloid 16OMT medium borderline
KN539250.1_FGP006 Alkaloid 16OMT medium borderline
KN539278.1_FGP011 Alkaloid 16OMT medium borderline
KN539503.1_FGP001 Alkaloid 16OMT medium borderline
KN539503.1_FGP004 Alkaloid 16OMT medium borderline
KN539748.1_FGP001 Alkaloid 16OMT medium borderline
KN539853.1_FGP002 Alkaloid 16OMT medium borderline
KN540252.1_FGP002 Alkaloid 16OMT medium borderline
KN540423.1_FGP001 Alkaloid 16OMT medium borderline
KN540448.1_FGP005 Alkaloid 16OMT medium borderline
KN540945.1_FGP002 Alkaloid 16OMT low borderline
KN540967.1_FGP001 Alkaloid 16OMT medium borderline
KN540967.1_FGP002 Alkaloid 16OMT medium borderline
KN541617.1_FGP002 Alkaloid 16OMT medium borderline
KN542532.1_FGP001 Alkaloid 16OMT medium borderline
KN545331.1_FGP001 Alkaloid 16OMT medium borderline
KN538824.1_FGP049 Alkaloid 6OMT_4OMT_SOMT medium borderline
KN539503.1_FGP003 Alkaloid 6OMT_4OMT_SOMT medium borderline
AMDW01017775.1_FGP001 Alkaloid 7DLGT low borderline
AMDW01022408.1_FGP001 Alkaloid 7DLGT low borderline
AMDW01023710.1_FGP001 Alkaloid 7DLGT medium pass
AMDW01031045.1_FGP001 Alkaloid 7DLGT medium pass
AMDW01031430.1_FGP001 Alkaloid 7DLGT medium pass
AMDW01034428.1_FGP001 Alkaloid 7DLGT low borderline
AMDW01036309.1_FGP001 Alkaloid 7DLGT medium pass
AMDW01039043.1_FGP001 Alkaloid 7DLGT medium pass
AMDW01040462.1_FGP001 Alkaloid 7DLGT medium pass
AMDW01068718.1_FGP001 Alkaloid 7DLGT medium pass
AMDW01081703.1_FGP001 Alkaloid 7DLGT medium pass
KN538687.1_FGP094 Alkaloid 7DLGT low borderline
KN538687.1_FGP102 Alkaloid 7DLGT low borderline
KN538687.1_FGP154 Alkaloid 7DLGT medium pass
KN538699.1_FGP006 Alkaloid 7DLGT medium pass
KN538759.1_FGP005 Alkaloid 7DLGT medium pass
KN538759.1_FGP007 Alkaloid 7DLGT low borderline
KN538768.1_FGP001 Alkaloid 7DLGT low borderline
KN538781.1_FGP002 Alkaloid 7DLGT low borderline
KN538781.1_FGP003 Alkaloid 7DLGT high pass