PlantSME Plant secondary metabolism enzyme database

Oryza longistaminata (oryza_longistaminata)

Imported from atlas release summary for Oryza longistaminata.

1740
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 461 19 BAHD (151) View species results
Alkaloid pathway 386 24 7DLGT (74) View species results
Phenylpropanoid pathway 383 13 POD (164) View species results
Flavonoid pathway 221 13 UFGT (108) View species results
Rosmarinic acid pathway 180 7 C4H (110) View species results
Steroid pathway 109 14 SMT1/SMT2/SMT3 (45) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1898 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 267 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CSE
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Gene Pathway Family Confidence Status
AMDW01013320.1_FGP001 Phenylpropanoid CSE medium pass
AMDW01034388.1_FGP001 Phenylpropanoid CSE low borderline
AMDW01036076.1_FGP001 Phenylpropanoid CSE medium pass
AMDW01039834.1_FGP001 Phenylpropanoid CSE medium pass
AMDW01060156.1_FGP001 Phenylpropanoid CSE medium pass
KN538689.1_FGP111 Phenylpropanoid CSE medium pass
KN538776.1_FGP010 Phenylpropanoid CSE medium pass
KN538778.1_FGP015 Phenylpropanoid CSE low borderline
KN538787.1_FGP012 Phenylpropanoid CSE medium pass
KN538901.1_FGP013 Phenylpropanoid CSE medium pass
KN539003.1_FGP015 Phenylpropanoid CSE medium pass
KN539027.1_FGP010 Phenylpropanoid CSE medium pass
KN539045.1_FGP007 Phenylpropanoid CSE medium pass
KN539143.1_FGP005 Phenylpropanoid CSE medium pass
KN539255.1_FGP006 Phenylpropanoid CSE low borderline
KN539274.1_FGP007 Phenylpropanoid CSE medium pass
KN539274.1_FGP014 Phenylpropanoid CSE low borderline
KN539277.1_FGP001 Phenylpropanoid CSE low borderline
KN539295.1_FGP009 Phenylpropanoid CSE medium pass
KN539384.1_FGP012 Phenylpropanoid CSE low borderline
KN539436.1_FGP002 Phenylpropanoid CSE medium pass
KN539436.1_FGP005 Phenylpropanoid CSE medium pass
KN539436.1_FGP008 Phenylpropanoid CSE medium pass
KN539436.1_FGP012 Phenylpropanoid CSE medium pass
KN539436.1_FGP013 Phenylpropanoid CSE medium pass
KN539583.1_FGP003 Phenylpropanoid CSE medium pass
KN539723.1_FGP004 Phenylpropanoid CSE low borderline
KN539824.1_FGP003 Phenylpropanoid CSE medium pass
KN540143.1_FGP002 Phenylpropanoid CSE medium pass
KN540230.1_FGP004 Phenylpropanoid CSE medium pass
KN540387.1_FGP001 Phenylpropanoid CSE medium pass
KN540550.1_FGP001 Phenylpropanoid CSE medium pass
KN540550.1_FGP003 Phenylpropanoid CSE medium pass
KN540550.1_FGP004 Phenylpropanoid CSE medium pass
KN540759.1_FGP002 Phenylpropanoid CSE low borderline
KN540759.1_FGP005 Phenylpropanoid CSE medium pass
KN540769.1_FGP002 Phenylpropanoid CSE medium pass
KN541445.1_FGP002 Phenylpropanoid CSE medium pass
KN541628.1_FGP002 Phenylpropanoid CSE medium pass
KN542823.1_FGP001 Phenylpropanoid CSE medium pass
KN542823.1_FGP002 Phenylpropanoid CSE medium pass
KN542964.1_FGP001 Phenylpropanoid CSE medium pass
KN542964.1_FGP002 Phenylpropanoid CSE medium pass
KN547287.1_FGP001 Phenylpropanoid CSE low borderline