PlantSME Plant secondary metabolism enzyme database

Oryza longistaminata (oryza_longistaminata)

Imported from atlas release summary for Oryza longistaminata.

1740
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 461 19 BAHD (151) View species results
Alkaloid pathway 386 24 7DLGT (74) View species results
Phenylpropanoid pathway 383 13 POD (164) View species results
Flavonoid pathway 221 13 UFGT (108) View species results
Rosmarinic acid pathway 180 7 C4H (110) View species results
Steroid pathway 109 14 SMT1/SMT2/SMT3 (45) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1898 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 267 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: PAL
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Gene Pathway Family Confidence Status
AMDW01016714.1_FGP001 Flavonoid PAL low borderline
AMDW01023722.1_FGP001 Flavonoid PAL medium pass
AMDW01066906.1_FGP001 Flavonoid PAL medium pass
KN538764.1_FGP003 Flavonoid PAL high pass
KN538764.1_FGP006 Flavonoid PAL high pass
KN538764.1_FGP009 Flavonoid PAL high pass
KN538764.1_FGP010 Flavonoid PAL high pass
KN538921.1_FGP015 Flavonoid PAL low borderline
KN539221.1_FGP006 Flavonoid PAL high pass
KN539221.1_FGP010 Flavonoid PAL high pass
KN539621.1_FGP002 Flavonoid PAL high pass
AMDW01016714.1_FGP001 Phenylpropanoid PAL low borderline
AMDW01023722.1_FGP001 Phenylpropanoid PAL medium pass
AMDW01066906.1_FGP001 Phenylpropanoid PAL medium pass
KN538764.1_FGP003 Phenylpropanoid PAL high pass
KN538764.1_FGP006 Phenylpropanoid PAL high pass
KN538764.1_FGP009 Phenylpropanoid PAL high pass
KN538764.1_FGP010 Phenylpropanoid PAL high pass
KN538921.1_FGP015 Phenylpropanoid PAL low borderline
KN539221.1_FGP006 Phenylpropanoid PAL high pass
KN539221.1_FGP010 Phenylpropanoid PAL high pass
KN539621.1_FGP002 Phenylpropanoid PAL high pass
AMDW01016714.1_FGP001 Rosmarinic Acid PAL low borderline
AMDW01023722.1_FGP001 Rosmarinic Acid PAL medium pass
AMDW01066906.1_FGP001 Rosmarinic Acid PAL medium pass
KN538764.1_FGP003 Rosmarinic Acid PAL high pass
KN538764.1_FGP006 Rosmarinic Acid PAL high pass
KN538764.1_FGP009 Rosmarinic Acid PAL high pass
KN538764.1_FGP010 Rosmarinic Acid PAL high pass
KN538921.1_FGP015 Rosmarinic Acid PAL low borderline
KN539221.1_FGP006 Rosmarinic Acid PAL high pass
KN539221.1_FGP010 Rosmarinic Acid PAL high pass
KN539621.1_FGP002 Rosmarinic Acid PAL high pass