PlantSME Plant secondary metabolism enzyme database

Oryza longistaminata (oryza_longistaminata)

Imported from atlas release summary for Oryza longistaminata.

1740
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 461 19 BAHD (151) View species results
Alkaloid pathway 386 24 7DLGT (74) View species results
Phenylpropanoid pathway 383 13 POD (164) View species results
Flavonoid pathway 221 13 UFGT (108) View species results
Rosmarinic acid pathway 180 7 C4H (110) View species results
Steroid pathway 109 14 SMT1/SMT2/SMT3 (45) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1898 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 267 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T16H
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Gene Pathway Family Confidence Status
AMDW01024875.1_FGP001 Alkaloid T16H low borderline
AMDW01025541.1_FGP001 Alkaloid T16H medium borderline
AMDW01030531.1_FGP001 Alkaloid T16H low borderline
KN538684.1_FGP142 Alkaloid T16H medium borderline
KN538727.1_FGP003 Alkaloid T16H medium borderline
KN538770.1_FGP038 Alkaloid T16H medium borderline
KN538805.1_FGP003 Alkaloid T16H medium borderline
KN538805.1_FGP008 Alkaloid T16H medium borderline
KN538850.1_FGP026 Alkaloid T16H medium borderline
KN538900.1_FGP004 Alkaloid T16H medium borderline
KN538991.1_FGP014 Alkaloid T16H low borderline
KN539031.1_FGP001 Alkaloid T16H medium borderline
KN539031.1_FGP004 Alkaloid T16H medium borderline
KN539396.1_FGP005 Alkaloid T16H medium borderline
KN539474.1_FGP005 Alkaloid T16H low borderline
KN539490.1_FGP004 Alkaloid T16H medium borderline
KN539620.1_FGP006 Alkaloid T16H medium borderline
KN539665.1_FGP003 Alkaloid T16H low borderline
KN539747.1_FGP002 Alkaloid T16H medium borderline
KN539747.1_FGP003 Alkaloid T16H medium borderline
KN539747.1_FGP006 Alkaloid T16H medium borderline
KN539747.1_FGP008 Alkaloid T16H medium borderline
KN539747.1_FGP009 Alkaloid T16H medium borderline
KN539747.1_FGP010 Alkaloid T16H medium borderline
KN539794.1_FGP001 Alkaloid T16H low borderline
KN539794.1_FGP003 Alkaloid T16H low borderline
KN539873.1_FGP002 Alkaloid T16H medium borderline
KN540075.1_FGP001 Alkaloid T16H low borderline
KN540235.1_FGP004 Alkaloid T16H low borderline
KN540273.1_FGP001 Alkaloid T16H medium borderline
KN540275.1_FGP003 Alkaloid T16H medium borderline
KN540386.1_FGP002 Alkaloid T16H medium borderline
KN540449.1_FGP003 Alkaloid T16H medium borderline
KN540734.1_FGP001 Alkaloid T16H medium borderline
KN540753.1_FGP004 Alkaloid T16H medium borderline
KN540875.1_FGP003 Alkaloid T16H medium borderline
KN541256.1_FGP002 Alkaloid T16H medium borderline
KN541492.1_FGP001 Alkaloid T16H medium borderline
KN542593.1_FGP001 Alkaloid T16H medium borderline
KN543557.1_FGP001 Alkaloid T16H medium borderline
KN546512.1_FGP001 Alkaloid T16H medium borderline