PlantSME Plant secondary metabolism enzyme database

Oryza longistaminata (oryza_longistaminata)

Imported from atlas release summary for Oryza longistaminata.

1740
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 461 19 BAHD (151) View species results
Alkaloid pathway 386 24 7DLGT (74) View species results
Phenylpropanoid pathway 383 13 POD (164) View species results
Flavonoid pathway 221 13 UFGT (108) View species results
Rosmarinic acid pathway 180 7 C4H (110) View species results
Steroid pathway 109 14 SMT1/SMT2/SMT3 (45) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1898 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 267 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: FNS
Reset
Gene Pathway Family Confidence Status
AMDW01013204.1_FGP001 Flavonoid FNS medium borderline
AMDW01014233.1_FGP001 Flavonoid FNS medium pass
AMDW01028745.1_FGP001 Flavonoid FNS medium borderline
AMDW01040110.1_FGP001 Flavonoid FNS medium borderline
AMDW01058671.1_FGP001 Flavonoid FNS medium pass
KN538746.1_FGP003 Flavonoid FNS medium borderline
KN538749.1_FGP012 Flavonoid FNS medium borderline
KN538765.1_FGP014 Flavonoid FNS medium borderline
KN538768.1_FGP053 Flavonoid FNS medium borderline
KN538770.1_FGP038 Flavonoid FNS medium borderline
KN538773.1_FGP001 Flavonoid FNS medium borderline
KN539078.1_FGP001 Flavonoid FNS medium borderline
KN539099.1_FGP007 Flavonoid FNS low borderline
KN539335.1_FGP004 Flavonoid FNS medium borderline
KN539373.1_FGP007 Flavonoid FNS low borderline
KN539439.1_FGP006 Flavonoid FNS medium borderline
KN539498.1_FGP010 Flavonoid FNS medium borderline
KN539502.1_FGP007 Flavonoid FNS medium borderline
KN539531.1_FGP006 Flavonoid FNS medium borderline
KN539620.1_FGP006 Flavonoid FNS medium borderline
KN539689.1_FGP002 Flavonoid FNS medium borderline
KN539873.1_FGP002 Flavonoid FNS medium borderline
KN540075.1_FGP001 Flavonoid FNS medium borderline
KN540141.1_FGP001 Flavonoid FNS medium borderline
KN540265.1_FGP004 Flavonoid FNS medium borderline
KN540265.1_FGP006 Flavonoid FNS medium borderline
KN540273.1_FGP001 Flavonoid FNS medium borderline
KN540275.1_FGP003 Flavonoid FNS medium borderline
KN540281.1_FGP003 Flavonoid FNS medium borderline
KN540569.1_FGP002 Flavonoid FNS medium borderline
KN540569.1_FGP003 Flavonoid FNS medium borderline
KN540875.1_FGP002 Flavonoid FNS medium borderline
KN541059.1_FGP002 Flavonoid FNS medium borderline
KN541256.1_FGP002 Flavonoid FNS medium borderline
KN541397.1_FGP001 Flavonoid FNS medium borderline
KN541607.1_FGP002 Flavonoid FNS medium pass
KN541672.1_FGP001 Flavonoid FNS medium borderline
KN541966.1_FGP001 Flavonoid FNS medium borderline
KN542593.1_FGP001 Flavonoid FNS medium borderline
KN543736.1_FGP002 Flavonoid FNS medium borderline