PlantSME Plant secondary metabolism enzyme database

Oryza longistaminata (oryza_longistaminata)

Imported from atlas release summary for Oryza longistaminata.

1740
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 461 19 BAHD (151) View species results
Alkaloid pathway 386 24 7DLGT (74) View species results
Phenylpropanoid pathway 383 13 POD (164) View species results
Flavonoid pathway 221 13 UFGT (108) View species results
Rosmarinic acid pathway 180 7 C4H (110) View species results
Steroid pathway 109 14 SMT1/SMT2/SMT3 (45) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1898 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 267 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3H
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Gene Pathway Family Confidence Status
AMDW01015012.1_FGP001 Flavonoid F3H medium pass
AMDW01015807.1_FGP001 Flavonoid F3H medium borderline
AMDW01018573.1_FGP001 Flavonoid F3H medium borderline
AMDW01018663.1_FGP001 Flavonoid F3H medium borderline
AMDW01023443.1_FGP001 Flavonoid F3H low borderline
AMDW01036777.1_FGP001 Flavonoid F3H medium borderline
AMDW01037220.1_FGP001 Flavonoid F3H medium borderline
AMDW01039283.1_FGP001 Flavonoid F3H medium borderline
AMDW01040210.1_FGP001 Flavonoid F3H medium borderline
AMDW01054995.1_FGP001 Flavonoid F3H low borderline
KN538692.1_FGP107 Flavonoid F3H low borderline
KN538727.1_FGP045 Flavonoid F3H medium borderline
KN538727.1_FGP073 Flavonoid F3H medium borderline
KN538734.1_FGP009 Flavonoid F3H medium borderline
KN538734.1_FGP013 Flavonoid F3H medium borderline
KN538740.1_FGP014 Flavonoid F3H medium borderline
KN538745.1_FGP010 Flavonoid F3H medium borderline
KN538745.1_FGP084 Flavonoid F3H medium pass
KN538755.1_FGP031 Flavonoid F3H low borderline
KN538764.1_FGP029 Flavonoid F3H low borderline
KN538765.1_FGP007 Flavonoid F3H low borderline
KN538770.1_FGP045 Flavonoid F3H medium borderline
KN538775.1_FGP029 Flavonoid F3H low borderline
KN538819.1_FGP052 Flavonoid F3H medium borderline
KN538861.1_FGP011 Flavonoid F3H low borderline
KN538898.1_FGP014 Flavonoid F3H medium pass
KN538912.1_FGP014 Flavonoid F3H medium borderline
KN538935.1_FGP002 Flavonoid F3H medium borderline
KN538994.1_FGP005 Flavonoid F3H medium borderline
KN539041.1_FGP004 Flavonoid F3H medium pass
KN539051.1_FGP003 Flavonoid F3H medium borderline
KN539085.1_FGP010 Flavonoid F3H medium borderline
KN539106.1_FGP011 Flavonoid F3H medium pass
KN539122.1_FGP012 Flavonoid F3H medium borderline
KN539186.1_FGP001 Flavonoid F3H medium borderline
KN539186.1_FGP004 Flavonoid F3H medium borderline
KN539186.1_FGP006 Flavonoid F3H medium borderline
KN539186.1_FGP008 Flavonoid F3H medium borderline
KN539186.1_FGP013 Flavonoid F3H medium borderline
KN539186.1_FGP014 Flavonoid F3H medium borderline
KN539186.1_FGP017 Flavonoid F3H medium borderline
KN539224.1_FGP014 Flavonoid F3H medium borderline
KN539288.1_FGP009 Flavonoid F3H low borderline
KN539380.1_FGP003 Flavonoid F3H medium borderline
KN539380.1_FGP005 Flavonoid F3H medium borderline
KN539401.1_FGP003 Flavonoid F3H medium borderline
KN539477.1_FGP005 Flavonoid F3H medium borderline
KN539507.1_FGP009 Flavonoid F3H low borderline
KN539561.1_FGP007 Flavonoid F3H low borderline
KN539690.1_FGP002 Flavonoid F3H medium borderline