PlantSME Plant secondary metabolism enzyme database

Oryza longistaminata (oryza_longistaminata)

Imported from atlas release summary for Oryza longistaminata.

1740
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 461 19 BAHD (151) View species results
Alkaloid pathway 386 24 7DLGT (74) View species results
Phenylpropanoid pathway 383 13 POD (164) View species results
Flavonoid pathway 221 13 UFGT (108) View species results
Rosmarinic acid pathway 180 7 C4H (110) View species results
Steroid pathway 109 14 SMT1/SMT2/SMT3 (45) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1898 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 267 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: ANR
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Gene Pathway Family Confidence Status
AMDW01019931.1_FGP001 Flavonoid ANR medium borderline
AMDW01070070.1_FGP001 Flavonoid ANR medium borderline
AMDW01077968.1_FGP001 Flavonoid ANR high pass
AMDW01081456.1_FGP001 Flavonoid ANR medium borderline
KN538705.1_FGP047 Flavonoid ANR medium borderline
KN538742.1_FGP050 Flavonoid ANR medium pass
KN538769.1_FGP035 Flavonoid ANR medium borderline
KN538814.1_FGP007 Flavonoid ANR low borderline
KN538815.1_FGP013 Flavonoid ANR medium pass
KN538828.1_FGP034 Flavonoid ANR medium borderline
KN538895.1_FGP026 Flavonoid ANR low borderline
KN538895.1_FGP031 Flavonoid ANR medium borderline
KN538895.1_FGP033 Flavonoid ANR medium pass
KN538895.1_FGP034 Flavonoid ANR low borderline
KN538924.1_FGP020 Flavonoid ANR medium borderline
KN538983.1_FGP008 Flavonoid ANR low borderline
KN539055.1_FGP009 Flavonoid ANR low borderline
KN539295.1_FGP008 Flavonoid ANR low borderline
KN539562.1_FGP003 Flavonoid ANR medium borderline
KN540217.1_FGP004 Flavonoid ANR low borderline
KN541631.1_FGP001 Flavonoid ANR medium borderline
KN541631.1_FGP002 Flavonoid ANR medium borderline
KN541631.1_FGP003 Flavonoid ANR medium borderline
KN541631.1_FGP004 Flavonoid ANR medium borderline
KN541631.1_FGP005 Flavonoid ANR medium borderline
KN542066.1_FGP003 Flavonoid ANR medium borderline
KN542066.1_FGP006 Flavonoid ANR low borderline
KN542268.1_FGP001 Flavonoid ANR medium pass
KN542268.1_FGP002 Flavonoid ANR medium borderline
KN544087.1_FGP001 Flavonoid ANR medium borderline
KN544597.1_FGP001 Flavonoid ANR medium borderline
KN548855.1_FGP001 Flavonoid ANR medium pass