PlantSME Plant secondary metabolism enzyme database

Oryza longistaminata (oryza_longistaminata)

Imported from atlas release summary for Oryza longistaminata.

1740
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 461 19 BAHD (151) View species results
Alkaloid pathway 386 24 7DLGT (74) View species results
Phenylpropanoid pathway 383 13 POD (164) View species results
Flavonoid pathway 221 13 UFGT (108) View species results
Rosmarinic acid pathway 180 7 C4H (110) View species results
Steroid pathway 109 14 SMT1/SMT2/SMT3 (45) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1898 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 267 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Gene Pathway Family Confidence Status
AMDW01012734.1_FGP001 Alkaloid T3O medium borderline
AMDW01012857.1_FGP001 Alkaloid T3O medium borderline
AMDW01014525.1_FGP001 Alkaloid T3O medium borderline
AMDW01027467.1_FGP001 Alkaloid T3O medium borderline
AMDW01028745.1_FGP001 Alkaloid T3O low borderline
AMDW01031540.1_FGP001 Alkaloid T3O medium borderline
AMDW01031715.1_FGP001 Alkaloid T3O high pass
AMDW01031869.1_FGP001 Alkaloid T3O medium borderline
AMDW01036617.1_FGP001 Alkaloid T3O medium borderline
AMDW01038693.1_FGP001 Alkaloid T3O medium borderline
AMDW01038999.1_FGP001 Alkaloid T3O medium borderline
AMDW01040136.1_FGP001 Alkaloid T3O medium borderline
KN538682.1_FGP209 Alkaloid T3O medium borderline
KN538687.1_FGP132 Alkaloid T3O medium borderline
KN538691.1_FGP143 Alkaloid T3O medium borderline
KN538691.1_FGP150 Alkaloid T3O medium borderline
KN538693.1_FGP019 Alkaloid T3O low borderline
KN538719.1_FGP040 Alkaloid T3O medium pass
KN538720.1_FGP035 Alkaloid T3O medium borderline
KN538723.1_FGP004 Alkaloid T3O medium borderline
KN538723.1_FGP091 Alkaloid T3O low borderline
KN538724.1_FGP039 Alkaloid T3O low borderline
KN538739.1_FGP045 Alkaloid T3O medium pass
KN538746.1_FGP003 Alkaloid T3O low borderline
KN538748.1_FGP007 Alkaloid T3O medium pass
KN538756.1_FGP017 Alkaloid T3O medium borderline
KN538761.1_FGP045 Alkaloid T3O medium borderline
KN538768.1_FGP046 Alkaloid T3O medium borderline
KN538773.1_FGP001 Alkaloid T3O medium borderline
KN538773.1_FGP014 Alkaloid T3O medium borderline
KN538779.1_FGP001 Alkaloid T3O medium pass
KN538781.1_FGP045 Alkaloid T3O medium borderline
KN538786.1_FGP001 Alkaloid T3O medium borderline
KN538798.1_FGP001 Alkaloid T3O medium borderline
KN538805.1_FGP005 Alkaloid T3O medium borderline
KN538812.1_FGP048 Alkaloid T3O low borderline
KN538827.1_FGP020 Alkaloid T3O medium borderline
KN538836.1_FGP010 Alkaloid T3O medium borderline
KN538883.1_FGP007 Alkaloid T3O low borderline
KN538886.1_FGP007 Alkaloid T3O medium pass
KN538900.1_FGP002 Alkaloid T3O medium borderline
KN538900.1_FGP007 Alkaloid T3O medium borderline
KN538900.1_FGP008 Alkaloid T3O medium borderline
KN538900.1_FGP013 Alkaloid T3O medium borderline
KN538900.1_FGP014 Alkaloid T3O medium borderline
KN538933.1_FGP003 Alkaloid T3O medium borderline
KN538933.1_FGP009 Alkaloid T3O medium borderline
KN538933.1_FGP015 Alkaloid T3O medium borderline
KN538933.1_FGP017 Alkaloid T3O medium borderline
KN538982.1_FGP002 Alkaloid T3O medium borderline