PlantSME Plant secondary metabolism enzyme database

Oryza longistaminata (oryza_longistaminata)

Imported from atlas release summary for Oryza longistaminata.

1740
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 461 19 BAHD (151) View species results
Alkaloid pathway 386 24 7DLGT (74) View species results
Phenylpropanoid pathway 383 13 POD (164) View species results
Flavonoid pathway 221 13 UFGT (108) View species results
Rosmarinic acid pathway 180 7 C4H (110) View species results
Steroid pathway 109 14 SMT1/SMT2/SMT3 (45) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1898 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 267 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CODM/T6ODM
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Gene Pathway Family Confidence Status
AMDW01018573.1_FGP001 Alkaloid CODM/T6ODM medium borderline
AMDW01018663.1_FGP001 Alkaloid CODM/T6ODM low borderline
AMDW01030873.1_FGP001 Alkaloid CODM/T6ODM low borderline
AMDW01034664.1_FGP001 Alkaloid CODM/T6ODM medium borderline
AMDW01036777.1_FGP001 Alkaloid CODM/T6ODM medium borderline
AMDW01039283.1_FGP001 Alkaloid CODM/T6ODM medium borderline
KN538692.1_FGP107 Alkaloid CODM/T6ODM medium borderline
KN538734.1_FGP009 Alkaloid CODM/T6ODM medium borderline
KN538745.1_FGP084 Alkaloid CODM/T6ODM medium borderline
KN538819.1_FGP052 Alkaloid CODM/T6ODM medium borderline
KN538861.1_FGP011 Alkaloid CODM/T6ODM medium borderline
KN538935.1_FGP002 Alkaloid CODM/T6ODM medium borderline
KN538994.1_FGP005 Alkaloid CODM/T6ODM medium borderline
KN539019.1_FGP001 Alkaloid CODM/T6ODM low borderline
KN539051.1_FGP003 Alkaloid CODM/T6ODM medium borderline
KN539085.1_FGP001 Alkaloid CODM/T6ODM medium borderline
KN539122.1_FGP012 Alkaloid CODM/T6ODM medium borderline
KN539288.1_FGP009 Alkaloid CODM/T6ODM medium borderline
KN539380.1_FGP003 Alkaloid CODM/T6ODM medium borderline
KN539477.1_FGP005 Alkaloid CODM/T6ODM medium borderline
KN539507.1_FGP009 Alkaloid CODM/T6ODM medium borderline
KN539768.1_FGP006 Alkaloid CODM/T6ODM low borderline
KN539795.1_FGP001 Alkaloid CODM/T6ODM medium borderline
KN539795.1_FGP003 Alkaloid CODM/T6ODM medium borderline
KN539968.1_FGP004 Alkaloid CODM/T6ODM medium borderline
KN540033.1_FGP004 Alkaloid CODM/T6ODM medium borderline
KN540057.1_FGP007 Alkaloid CODM/T6ODM low borderline
KN540124.1_FGP006 Alkaloid CODM/T6ODM medium borderline
KN540231.1_FGP001 Alkaloid CODM/T6ODM medium borderline
KN540345.1_FGP009 Alkaloid CODM/T6ODM medium borderline
KN540414.1_FGP003 Alkaloid CODM/T6ODM medium borderline
KN540414.1_FGP006 Alkaloid CODM/T6ODM medium borderline
KN540522.1_FGP004 Alkaloid CODM/T6ODM medium borderline
KN540589.1_FGP002 Alkaloid CODM/T6ODM medium borderline
KN540636.1_FGP001 Alkaloid CODM/T6ODM medium borderline
KN541210.1_FGP001 Alkaloid CODM/T6ODM medium borderline
KN541620.1_FGP003 Alkaloid CODM/T6ODM low borderline
KN541837.1_FGP001 Alkaloid CODM/T6ODM medium borderline
KN542261.1_FGP002 Alkaloid CODM/T6ODM medium borderline
KN543129.1_FGP001 Alkaloid CODM/T6ODM medium borderline