PlantSME Plant secondary metabolism enzyme database

Oryza glumaepatula (oryza_glumaepatula)

Imported from atlas release summary for Oryza glumaepatula.

1971
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 585 19 BAHD (210) View species results
Alkaloid pathway 460 24 7DLGT (86) View species results
Flavonoid pathway 313 13 UFGT (179) View species results
Phenylpropanoid pathway 312 13 POD (108) View species results
Rosmarinic acid pathway 165 7 C4H (86) View species results
Steroid pathway 136 13 CAS (53) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2030 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 381 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
Oglu01G0034940.1 Alkaloid 16OMT medium borderline
Oglu02G0024880.1 Alkaloid 16OMT medium borderline
Oglu04G0001700.1 Alkaloid 16OMT medium borderline
Oglu04G0002550.1 Alkaloid 16OMT medium borderline
Oglu04G0003180.1 Alkaloid 16OMT medium borderline
Oglu05G0023700.1 Alkaloid 16OMT medium borderline
Oglu05G0023710.1 Alkaloid 16OMT medium borderline
Oglu06G0009470.1 Alkaloid 16OMT medium borderline
Oglu06G0011540.1 Alkaloid 16OMT medium borderline
Oglu06G0027820.1 Alkaloid 16OMT low borderline
Oglu07G0012320.1 Alkaloid 16OMT medium borderline
Oglu07G0012320.2 Alkaloid 16OMT medium borderline
Oglu07G0012400.1 Alkaloid 16OMT medium borderline
Oglu07G0012430.1 Alkaloid 16OMT medium borderline
Oglu07G0012440.1 Alkaloid 16OMT medium borderline
Oglu07G0013980.1 Alkaloid 16OMT low borderline
Oglu07G0023810.1 Alkaloid 16OMT low borderline
Oglu07G0023810.2 Alkaloid 16OMT low borderline
Oglu07G0023810.3 Alkaloid 16OMT low borderline
Oglu07G0024660.1 Alkaloid 16OMT low borderline
Oglu08G0003480.1 Alkaloid 16OMT medium borderline
Oglu08G0009970.1 Alkaloid 16OMT medium borderline
Oglu08G0017390.2 Alkaloid 16OMT medium borderline
Oglu09G0006900.1 Alkaloid 16OMT medium borderline
Oglu10G0000810.1 Alkaloid 16OMT medium borderline
Oglu10G0000830.1 Alkaloid 16OMT medium borderline
Oglu10G0017770.1 Alkaloid 16OMT low borderline
Oglu10G0017770.2 Alkaloid 16OMT low borderline
Oglu11G0007450.1 Alkaloid 16OMT medium borderline
Oglu11G0010460.1 Alkaloid 16OMT medium borderline
Oglu11G0010510.1 Alkaloid 16OMT medium borderline
Oglu11G0010520.1 Alkaloid 16OMT medium borderline
Oglu11G0010530.1 Alkaloid 16OMT medium borderline
Oglu11G0015370.1 Alkaloid 16OMT medium borderline
Oglu12G0008320.1 Alkaloid 16OMT medium borderline
Oglu12G0011670.1 Alkaloid 16OMT medium borderline
Oglu12G0011680.1 Alkaloid 16OMT medium borderline
Oglu12G0011700.1 Alkaloid 16OMT medium borderline
Oglu12G0011710.1 Alkaloid 16OMT medium borderline
Oglu02G0008710.1 Alkaloid 6OMT_4OMT_SOMT low borderline
Oglu02G0024890.1 Alkaloid 6OMT_4OMT_SOMT medium borderline
Oglu07G0024100.1 Alkaloid 6OMT_4OMT_SOMT medium borderline
Oglu08G0017390.1 Alkaloid 6OMT_4OMT_SOMT medium borderline
Oglu10G0003320.1 Alkaloid 6OMT_4OMT_SOMT low borderline
Oglu11G0010560.1 Alkaloid 6OMT_4OMT_SOMT medium borderline
Oglu12G0012530.1 Alkaloid 6OMT_4OMT_SOMT medium pass
Oglu01G0005320.1 Alkaloid 7DLGT low borderline
Oglu01G0005330.1 Alkaloid 7DLGT medium pass
Oglu01G0005340.1 Alkaloid 7DLGT low borderline
Oglu01G0005340.2 Alkaloid 7DLGT low borderline