PlantSME Plant secondary metabolism enzyme database

Oryza glumaepatula (oryza_glumaepatula)

Imported from atlas release summary for Oryza glumaepatula.

1971
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 585 19 BAHD (210) View species results
Alkaloid pathway 460 24 7DLGT (86) View species results
Flavonoid pathway 313 13 UFGT (179) View species results
Phenylpropanoid pathway 312 13 POD (108) View species results
Rosmarinic acid pathway 165 7 C4H (86) View species results
Steroid pathway 136 13 CAS (53) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2030 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 381 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: RAS
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Gene Pathway Family Confidence Status
Oglu01G0000380.1 Rosmarinic Acid RAS medium pass
Oglu01G0006020.1 Rosmarinic Acid RAS medium pass
Oglu01G0009280.1 Rosmarinic Acid RAS low borderline
Oglu01G0009280.2 Rosmarinic Acid RAS low borderline
Oglu01G0016500.1 Rosmarinic Acid RAS medium pass
Oglu01G0018550.1 Rosmarinic Acid RAS medium pass
Oglu01G0026070.1 Rosmarinic Acid RAS low borderline
Oglu01G0026080.1 Rosmarinic Acid RAS low borderline
Oglu02G0001430.1 Rosmarinic Acid RAS low borderline
Oglu02G0001430.2 Rosmarinic Acid RAS low borderline
Oglu02G0013600.1 Rosmarinic Acid RAS low borderline
Oglu02G0039330.1 Rosmarinic Acid RAS low borderline
Oglu03G0038700.1 Rosmarinic Acid RAS low borderline
Oglu04G0017380.1 Rosmarinic Acid RAS medium pass
Oglu04G0017380.2 Rosmarinic Acid RAS medium pass
Oglu04G0024340.1 Rosmarinic Acid RAS low borderline
Oglu05G0001210.1 Rosmarinic Acid RAS low borderline
Oglu05G0005080.1 Rosmarinic Acid RAS low borderline
Oglu05G0023560.1 Rosmarinic Acid RAS low borderline
Oglu05G0023560.2 Rosmarinic Acid RAS low borderline
Oglu06G0003780.1 Rosmarinic Acid RAS low borderline
Oglu06G0005700.1 Rosmarinic Acid RAS medium pass
Oglu06G0028060.1 Rosmarinic Acid RAS medium pass
Oglu08G0006340.1 Rosmarinic Acid RAS medium pass
Oglu08G0023260.1 Rosmarinic Acid RAS medium pass
Oglu08G0023260.2 Rosmarinic Acid RAS medium pass
Oglu09G0010830.1 Rosmarinic Acid RAS medium pass
Oglu09G0018610.1 Rosmarinic Acid RAS medium pass
Oglu10G0000310.1 Rosmarinic Acid RAS low borderline
Oglu10G0000330.1 Rosmarinic Acid RAS low borderline
Oglu10G0000980.1 Rosmarinic Acid RAS low borderline
Oglu10G0005920.1 Rosmarinic Acid RAS low borderline
Oglu10G0007870.1 Rosmarinic Acid RAS low borderline
Oglu10G0007890.1 Rosmarinic Acid RAS low borderline
Oglu10G0007900.1 Rosmarinic Acid RAS low borderline
Oglu10G0014560.1 Rosmarinic Acid RAS medium pass
Oglu11G0004860.1 Rosmarinic Acid RAS medium pass
Oglu11G0013910.1 Rosmarinic Acid RAS medium pass
Oglu11G0020100.1 Rosmarinic Acid RAS medium pass
Oglu11G0020150.1 Rosmarinic Acid RAS low borderline
Oglu12G0007810.1 Rosmarinic Acid RAS low borderline