PlantSME Plant secondary metabolism enzyme database

Oryza glumaepatula (oryza_glumaepatula)

Imported from atlas release summary for Oryza glumaepatula.

1971
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 585 19 BAHD (210) View species results
Alkaloid pathway 460 24 7DLGT (86) View species results
Flavonoid pathway 313 13 UFGT (179) View species results
Phenylpropanoid pathway 312 13 POD (108) View species results
Rosmarinic acid pathway 165 7 C4H (86) View species results
Steroid pathway 136 13 CAS (53) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2030 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 381 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Gene Pathway Family Confidence Status
Oglu01G0005860.1 Alkaloid T3O medium pass
Oglu01G0006750.1 Alkaloid T3O medium pass
Oglu01G0006750.2 Alkaloid T3O medium pass
Oglu01G0007940.1 Alkaloid T3O medium pass
Oglu01G0007960.1 Alkaloid T3O medium pass
Oglu01G0007970.1 Alkaloid T3O medium pass
Oglu01G0009120.1 Alkaloid T3O medium borderline
Oglu01G0018120.1 Alkaloid T3O medium borderline
Oglu01G0022000.1 Alkaloid T3O medium borderline
Oglu01G0031390.1 Alkaloid T3O medium borderline
Oglu01G0031400.1 Alkaloid T3O medium borderline
Oglu01G0038080.1 Alkaloid T3O low borderline
Oglu01G0038080.2 Alkaloid T3O low borderline
Oglu01G0038110.1 Alkaloid T3O low borderline
Oglu01G0038110.2 Alkaloid T3O medium pass
Oglu01G0038270.1 Alkaloid T3O medium pass
Oglu01G0041110.1 Alkaloid T3O low borderline
Oglu01G0041590.1 Alkaloid T3O medium pass
Oglu01G0047840.1 Alkaloid T3O low borderline
Oglu01G0047850.1 Alkaloid T3O low borderline
Oglu01G0048230.1 Alkaloid T3O medium borderline
Oglu02G0000710.1 Alkaloid T3O low borderline
Oglu02G0006320.1 Alkaloid T3O medium borderline
Oglu02G0006360.1 Alkaloid T3O medium borderline
Oglu02G0006370.1 Alkaloid T3O medium borderline
Oglu02G0006370.2 Alkaloid T3O medium borderline
Oglu02G0006370.3 Alkaloid T3O medium borderline
Oglu02G0006400.1 Alkaloid T3O medium borderline
Oglu02G0006420.1 Alkaloid T3O low borderline
Oglu02G0006450.2 Alkaloid T3O medium borderline
Oglu02G0008830.1 Alkaloid T3O medium borderline
Oglu02G0008830.2 Alkaloid T3O medium borderline
Oglu02G0008840.1 Alkaloid T3O medium pass
Oglu02G0011910.1 Alkaloid T3O medium borderline
Oglu02G0016040.1 Alkaloid T3O medium borderline
Oglu02G0017490.1 Alkaloid T3O medium borderline
Oglu02G0017500.1 Alkaloid T3O medium borderline
Oglu02G0017500.2 Alkaloid T3O medium borderline
Oglu02G0017570.2 Alkaloid T3O medium borderline
Oglu02G0017570.3 Alkaloid T3O medium pass
Oglu02G0019040.1 Alkaloid T3O medium borderline
Oglu02G0021170.1 Alkaloid T3O medium borderline
Oglu02G0021200.1 Alkaloid T3O medium borderline
Oglu02G0021210.1 Alkaloid T3O medium borderline
Oglu02G0021240.1 Alkaloid T3O medium borderline
Oglu02G0021250.1 Alkaloid T3O medium borderline
Oglu02G0021290.1 Alkaloid T3O medium borderline
Oglu02G0022820.1 Alkaloid T3O medium pass
Oglu02G0023130.1 Alkaloid T3O medium borderline
Oglu02G0023240.1 Alkaloid T3O medium borderline