PlantSME Plant secondary metabolism enzyme database

Oryza glumaepatula (oryza_glumaepatula)

Imported from atlas release summary for Oryza glumaepatula.

1971
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 585 19 BAHD (210) View species results
Alkaloid pathway 460 24 7DLGT (86) View species results
Flavonoid pathway 313 13 UFGT (179) View species results
Phenylpropanoid pathway 312 13 POD (108) View species results
Rosmarinic acid pathway 165 7 C4H (86) View species results
Steroid pathway 136 13 CAS (53) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2030 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 381 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: COR
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Gene Pathway Family Confidence Status Best Target
Oglu01G0040660.1 Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
Oglu01G0040660.2 Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
Oglu01G0040670.1 Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
Oglu01G0040670.2 Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
Oglu01G0040680.1 Alkaloid COR medium pass COR__00003__sp_Q9SQ68_COR13_PAPSO
Oglu01G0040680.2 Alkaloid COR medium pass COR__00001__sp_B9VRJ2_COR15_PAPSO
Oglu02G0001680.1 Alkaloid COR medium pass COR__00004__sp_Q9SQ69_COR12_PAPSO
Oglu03G0009770.1 Alkaloid COR medium pass COR__00005__sp_Q9SQ70_COR11_PAPSO
Oglu04G0013670.1 Alkaloid COR low borderline COR__00002__sp_Q9SQ67_COR14_PAPSO
Oglu04G0013670.2 Alkaloid COR low borderline COR__00002__sp_Q9SQ67_COR14_PAPSO
Oglu04G0013670.3 Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
Oglu05G0019790.1 Alkaloid COR medium pass COR__00004__sp_Q9SQ69_COR12_PAPSO
Oglu05G0019800.1 Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
Oglu05G0020820.7 Alkaloid COR medium pass COR__00001__sp_B9VRJ2_COR15_PAPSO
Oglu10G0000280.1 Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
Oglu10G0000530.1 Alkaloid COR medium pass COR__00003__sp_Q9SQ68_COR13_PAPSO
Oglu10G0000550.1 Alkaloid COR low borderline COR__00002__sp_Q9SQ67_COR14_PAPSO
Oglu10G0000560.1 Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
Oglu10G0000570.1 Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
Oglu10G0000570.2 Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO