PlantSME Plant secondary metabolism enzyme database

Oryza glumaepatula (oryza_glumaepatula)

Imported from atlas release summary for Oryza glumaepatula.

1971
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 585 19 BAHD (210) View species results
Alkaloid pathway 460 24 7DLGT (86) View species results
Flavonoid pathway 313 13 UFGT (179) View species results
Phenylpropanoid pathway 312 13 POD (108) View species results
Rosmarinic acid pathway 165 7 C4H (86) View species results
Steroid pathway 136 13 CAS (53) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2030 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 381 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: PYKS
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Gene Pathway Family Confidence Status
Oglu01G0021420.1 Alkaloid PYKS low borderline
Oglu01G0025260.1 Alkaloid PYKS high pass
Oglu02G0008010.1 Alkaloid PYKS low borderline
Oglu02G0031660.1 Alkaloid PYKS low borderline
Oglu02G0037720.1 Alkaloid PYKS low borderline
Oglu03G0005900.1 Alkaloid PYKS low borderline
Oglu03G0008710.1 Alkaloid PYKS low borderline
Oglu03G0009990.1 Alkaloid PYKS low borderline
Oglu03G0019970.1 Alkaloid PYKS low borderline
Oglu03G0019980.1 Alkaloid PYKS low borderline
Oglu03G0019990.1 Alkaloid PYKS low borderline
Oglu03G0028990.1 Alkaloid PYKS medium pass
Oglu03G0038510.1 Alkaloid PYKS low borderline
Oglu04G0000130.1 Alkaloid PYKS high pass
Oglu04G0006660.1 Alkaloid PYKS medium pass
Oglu04G0026680.1 Alkaloid PYKS low borderline
Oglu05G0007390.1 Alkaloid PYKS high pass
Oglu05G0007400.1 Alkaloid PYKS high pass
Oglu05G0007410.1 Alkaloid PYKS high pass
Oglu05G0022440.1 Alkaloid PYKS medium pass
Oglu05G0027390.1 Alkaloid PYKS low borderline
Oglu05G0027890.1 Alkaloid PYKS low borderline
Oglu06G0010750.1 Alkaloid PYKS low borderline
Oglu06G0010770.1 Alkaloid PYKS low borderline
Oglu06G0010790.1 Alkaloid PYKS low borderline
Oglu06G0020870.1 Alkaloid PYKS low borderline
Oglu07G0002350.1 Alkaloid PYKS low borderline
Oglu07G0006860.1 Alkaloid PYKS high pass
Oglu07G0008720.1 Alkaloid PYKS high pass
Oglu07G0010760.1 Alkaloid PYKS high pass
Oglu07G0014760.1 Alkaloid PYKS high pass
Oglu07G0014770.1 Alkaloid PYKS high pass
Oglu07G0016220.1 Alkaloid PYKS high pass
Oglu07G0016240.1 Alkaloid PYKS high pass
Oglu07G0016280.1 Alkaloid PYKS high pass
Oglu09G0007560.1 Alkaloid PYKS low borderline
Oglu10G0002800.1 Alkaloid PYKS low borderline
Oglu10G0002840.1 Alkaloid PYKS high pass
Oglu10G0003340.1 Alkaloid PYKS high pass
Oglu10G0003350.1 Alkaloid PYKS high pass
Oglu10G0003580.1 Alkaloid PYKS medium pass
Oglu10G0003590.1 Alkaloid PYKS high pass
Oglu10G0003600.1 Alkaloid PYKS high pass
Oglu10G0003870.1 Alkaloid PYKS high pass
Oglu10G0003890.1 Alkaloid PYKS medium pass
Oglu10G0009740.1 Alkaloid PYKS low borderline
Oglu10G0012630.1 Alkaloid PYKS low borderline
Oglu10G0013340.1 Alkaloid PYKS medium pass
Oglu11G0014800.1 Alkaloid PYKS high pass
Oglu11G0014820.1 Alkaloid PYKS high pass