PlantSME Plant secondary metabolism enzyme database

Oryza glumaepatula (oryza_glumaepatula)

Imported from atlas release summary for Oryza glumaepatula.

1971
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 585 19 BAHD (210) View species results
Alkaloid pathway 460 24 7DLGT (86) View species results
Flavonoid pathway 313 13 UFGT (179) View species results
Phenylpropanoid pathway 312 13 POD (108) View species results
Rosmarinic acid pathway 165 7 C4H (86) View species results
Steroid pathway 136 13 CAS (53) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2030 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 381 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: BBE
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Gene Pathway Family Confidence Status
Oglu01G0013230.1 Alkaloid BBE low borderline
Oglu01G0018630.1 Alkaloid BBE medium borderline
Oglu01G0026220.1 Alkaloid BBE low borderline
Oglu02G0010010.1 Alkaloid BBE medium borderline
Oglu05G0010230.1 Alkaloid BBE low borderline
Oglu05G0013450.1 Alkaloid BBE low borderline
Oglu06G0018780.1 Alkaloid BBE medium borderline
Oglu06G0018790.1 Alkaloid BBE medium borderline
Oglu06G0018800.1 Alkaloid BBE medium borderline
Oglu06G0018820.1 Alkaloid BBE medium borderline
Oglu06G0018830.1 Alkaloid BBE low borderline
Oglu06G0018840.1 Alkaloid BBE medium borderline
Oglu07G0003330.1 Alkaloid BBE low borderline
Oglu08G0003540.1 Alkaloid BBE low borderline
Oglu08G0003550.1 Alkaloid BBE medium borderline
Oglu08G0012230.1 Alkaloid BBE medium borderline
Oglu08G0021970.1 Alkaloid BBE low borderline
Oglu11G0013590.1 Alkaloid BBE medium borderline