PlantSME Plant secondary metabolism enzyme database

Oryza glumaepatula (oryza_glumaepatula)

Imported from atlas release summary for Oryza glumaepatula.

1971
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 585 19 BAHD (210) View species results
Alkaloid pathway 460 24 7DLGT (86) View species results
Flavonoid pathway 313 13 UFGT (179) View species results
Phenylpropanoid pathway 312 13 POD (108) View species results
Rosmarinic acid pathway 165 7 C4H (86) View species results
Steroid pathway 136 13 CAS (53) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2030 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 381 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: GS
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Gene Pathway Family Confidence Status
Oglu01G0034920.1 Alkaloid GS low borderline
Oglu02G0006570.1 Alkaloid GS high pass
Oglu02G0021090.1 Alkaloid GS low borderline
Oglu03G0000170.1 Alkaloid GS low borderline
Oglu03G0008930.1 Alkaloid GS high pass
Oglu04G0000280.1 Alkaloid GS low borderline
Oglu04G0004120.1 Alkaloid GS high pass
Oglu04G0008550.1 Alkaloid GS low borderline
Oglu04G0008580.1 Alkaloid GS low borderline
Oglu04G0008580.2 Alkaloid GS low borderline
Oglu04G0008580.3 Alkaloid GS low borderline
Oglu04G0008980.1 Alkaloid GS low borderline
Oglu04G0024570.1 Alkaloid GS high pass
Oglu05G0011670.1 Alkaloid GS low borderline
Oglu08G0008930.1 Alkaloid GS high pass
Oglu08G0013920.1 Alkaloid GS low borderline
Oglu08G0023390.1 Alkaloid GS medium pass
Oglu09G0009570.1 Alkaloid GS medium pass
Oglu09G0009580.1 Alkaloid GS medium pass
Oglu09G0009600.1 Alkaloid GS high pass
Oglu09G0009620.1 Alkaloid GS medium pass
Oglu09G0009630.1 Alkaloid GS medium pass
Oglu09G0009650.1 Alkaloid GS high pass
Oglu09G0015850.1 Alkaloid GS low borderline
Oglu09G0015850.2 Alkaloid GS low borderline
Oglu09G0015870.1 Alkaloid GS low borderline
Oglu09G0015870.2 Alkaloid GS low borderline
Oglu09G0015870.3 Alkaloid GS low borderline
Oglu09G0015870.4 Alkaloid GS low borderline
Oglu10G0004500.1 Alkaloid GS high pass
Oglu10G0004500.2 Alkaloid GS high pass
Oglu10G0010460.1 Alkaloid GS high pass
Oglu10G0018320.1 Alkaloid GS low borderline
Oglu10G0018320.2 Alkaloid GS low borderline
Oglu10G0018320.3 Alkaloid GS low borderline
Oglu10G0018320.4 Alkaloid GS low borderline
Oglu11G0000670.1 Alkaloid GS low borderline