PlantSME Plant secondary metabolism enzyme database

Oryza glumaepatula (oryza_glumaepatula)

Imported from atlas release summary for Oryza glumaepatula.

1971
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 585 19 BAHD (210) View species results
Alkaloid pathway 460 24 7DLGT (86) View species results
Flavonoid pathway 313 13 UFGT (179) View species results
Phenylpropanoid pathway 312 13 POD (108) View species results
Rosmarinic acid pathway 165 7 C4H (86) View species results
Steroid pathway 136 13 CAS (53) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2030 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 381 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 8HGO
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Gene Pathway Family Confidence Status
Oglu02G0025500.1 Alkaloid 8HGO medium borderline
Oglu02G0025500.2 Alkaloid 8HGO medium pass
Oglu02G0037880.1 Alkaloid 8HGO medium borderline
Oglu03G0006520.1 Alkaloid 8HGO medium borderline
Oglu03G0006530.1 Alkaloid 8HGO medium borderline
Oglu03G0006530.2 Alkaloid 8HGO medium borderline
Oglu03G0006530.3 Alkaloid 8HGO medium borderline
Oglu03G0006530.4 Alkaloid 8HGO medium borderline
Oglu03G0006530.5 Alkaloid 8HGO medium borderline
Oglu03G0008370.1 Alkaloid 8HGO low borderline
Oglu07G0005220.1 Alkaloid 8HGO low borderline
Oglu07G0016840.1 Alkaloid 8HGO low borderline
Oglu07G0016930.1 Alkaloid 8HGO low borderline
Oglu07G0022250.1 Alkaloid 8HGO medium borderline
Oglu07G0022260.1 Alkaloid 8HGO medium borderline
Oglu10G0002970.1 Alkaloid 8HGO medium pass
Oglu10G0002970.2 Alkaloid 8HGO medium borderline
Oglu10G0002970.3 Alkaloid 8HGO medium borderline
Oglu10G0015110.1 Alkaloid 8HGO low borderline
Oglu10G0015110.2 Alkaloid 8HGO low borderline
Oglu11G0006110.1 Alkaloid 8HGO medium borderline
Oglu11G0006120.1 Alkaloid 8HGO medium borderline
Oglu11G0006140.1 Alkaloid 8HGO medium borderline