PlantSME Plant secondary metabolism enzyme database

Oryza glumaepatula (oryza_glumaepatula)

Imported from atlas release summary for Oryza glumaepatula.

1971
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 585 19 BAHD (210) View species results
Alkaloid pathway 460 24 7DLGT (86) View species results
Flavonoid pathway 313 13 UFGT (179) View species results
Phenylpropanoid pathway 312 13 POD (108) View species results
Rosmarinic acid pathway 165 7 C4H (86) View species results
Steroid pathway 136 13 CAS (53) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2030 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 381 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: H6H
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Gene Pathway Family Confidence Status
Oglu01G0015480.1 Alkaloid H6H low borderline
Oglu01G0034290.1 Alkaloid H6H low borderline
Oglu01G0039430.1 Alkaloid H6H low borderline
Oglu01G0039570.1 Alkaloid H6H medium borderline
Oglu01G0043310.1 Alkaloid H6H medium pass
Oglu02G0022510.1 Alkaloid H6H low borderline
Oglu02G0034850.1 Alkaloid H6H low borderline
Oglu02G0034890.1 Alkaloid H6H low borderline
Oglu03G0023170.1 Alkaloid H6H medium borderline
Oglu03G0030090.1 Alkaloid H6H medium borderline
Oglu03G0040910.1 Alkaloid H6H medium borderline
Oglu04G0011050.1 Alkaloid H6H low borderline
Oglu04G0011050.2 Alkaloid H6H low borderline
Oglu04G0027930.1 Alkaloid H6H medium borderline
Oglu05G0017710.3 Alkaloid H6H medium borderline
Oglu05G0023620.1 Alkaloid H6H low borderline
Oglu05G0027980.1 Alkaloid H6H low borderline
Oglu06G0012290.1 Alkaloid H6H low borderline
Oglu07G0000290.1 Alkaloid H6H medium pass
Oglu07G0003820.1 Alkaloid H6H medium borderline
Oglu07G0003830.1 Alkaloid H6H medium pass
Oglu08G0015170.1 Alkaloid H6H low borderline
Oglu09G0002340.1 Alkaloid H6H low borderline
Oglu09G0002490.1 Alkaloid H6H low borderline
Oglu09G0002490.2 Alkaloid H6H low borderline
Oglu09G0002490.3 Alkaloid H6H low borderline
Oglu09G0002490.4 Alkaloid H6H low borderline
Oglu09G0012610.1 Alkaloid H6H medium borderline
Oglu10G0005130.1 Alkaloid H6H low borderline
Oglu10G0005130.2 Alkaloid H6H low borderline
Oglu10G0016730.1 Alkaloid H6H low borderline
Oglu10G0016740.1 Alkaloid H6H medium borderline
Oglu10G0018170.1 Alkaloid H6H medium borderline
Oglu11G0005160.1 Alkaloid H6H medium pass
Oglu11G0011700.1 Alkaloid H6H medium borderline
Oglu12G0018770.1 Alkaloid H6H medium borderline