PlantSME Plant secondary metabolism enzyme database

Oryza glumaepatula (oryza_glumaepatula)

Imported from atlas release summary for Oryza glumaepatula.

1971
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 585 19 BAHD (210) View species results
Alkaloid pathway 460 24 7DLGT (86) View species results
Flavonoid pathway 313 13 UFGT (179) View species results
Phenylpropanoid pathway 312 13 POD (108) View species results
Rosmarinic acid pathway 165 7 C4H (86) View species results
Steroid pathway 136 13 CAS (53) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2030 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 381 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: LAC
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Gene Pathway Family Confidence Status
Oglu01G0018000.1 Phenylpropanoid LAC medium pass
Oglu01G0027320.1 Phenylpropanoid LAC medium pass
Oglu01G0038600.1 Phenylpropanoid LAC low borderline
Oglu01G0040350.1 Phenylpropanoid LAC medium pass
Oglu01G0040360.1 Phenylpropanoid LAC medium pass
Oglu01G0040480.1 Phenylpropanoid LAC medium pass
Oglu01G0040860.1 Phenylpropanoid LAC medium pass
Oglu02G0032810.1 Phenylpropanoid LAC medium pass
Oglu03G0012050.1 Phenylpropanoid LAC medium pass
Oglu03G0013970.1 Phenylpropanoid LAC medium pass
Oglu04G0021260.1 Phenylpropanoid LAC low borderline
Oglu05G0019950.1 Phenylpropanoid LAC medium pass
Oglu05G0019960.1 Phenylpropanoid LAC medium pass
Oglu05G0019980.1 Phenylpropanoid LAC medium pass
Oglu05G0019990.1 Phenylpropanoid LAC medium pass
Oglu06G0010060.1 Phenylpropanoid LAC medium pass
Oglu06G0019730.1 Phenylpropanoid LAC medium pass
Oglu06G0019760.1 Phenylpropanoid LAC low borderline
Oglu06G0019760.2 Phenylpropanoid LAC low borderline
Oglu06G0019760.3 Phenylpropanoid LAC low borderline
Oglu06G0019760.4 Phenylpropanoid LAC low borderline
Oglu07G0000090.1 Phenylpropanoid LAC medium pass
Oglu07G0001200.1 Phenylpropanoid LAC low borderline
Oglu08G0003250.1 Phenylpropanoid LAC low borderline
Oglu09G0007890.1 Phenylpropanoid LAC medium pass
Oglu09G0016120.1 Phenylpropanoid LAC medium pass
Oglu10G0006540.1 Phenylpropanoid LAC medium pass
Oglu10G0010610.1 Phenylpropanoid LAC low borderline
Oglu10G0010700.1 Phenylpropanoid LAC medium pass
Oglu10G0010720.1 Phenylpropanoid LAC medium pass
Oglu11G0000510.1 Phenylpropanoid LAC medium pass
Oglu11G0008560.1 Phenylpropanoid LAC medium pass
Oglu11G0020070.1 Phenylpropanoid LAC low borderline
Oglu11G0022730.1 Phenylpropanoid LAC medium pass
Oglu12G0000510.1 Phenylpropanoid LAC medium pass
Oglu12G0008810.1 Phenylpropanoid LAC medium pass
Oglu12G0008870.1 Phenylpropanoid LAC medium pass
Oglu12G0008900.1 Phenylpropanoid LAC medium pass