PlantSME Plant secondary metabolism enzyme database

Oryza glumaepatula (oryza_glumaepatula)

Imported from atlas release summary for Oryza glumaepatula.

1971
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 585 19 BAHD (210) View species results
Alkaloid pathway 460 24 7DLGT (86) View species results
Flavonoid pathway 313 13 UFGT (179) View species results
Phenylpropanoid pathway 312 13 POD (108) View species results
Rosmarinic acid pathway 165 7 C4H (86) View species results
Steroid pathway 136 13 CAS (53) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2030 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 381 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: ANS/LDOX
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Gene Pathway Family Confidence Status Best Target
Oglu01G0007910.1 Flavonoid ANS/LDOX medium borderline ANS_LDOX__00004__sp_O80449_JOX4_ARATH
Oglu01G0016660.1 Flavonoid ANS/LDOX medium borderline ANS_LDOX__00004__sp_O80449_JOX4_ARATH
Oglu02G0014100.1 Flavonoid ANS/LDOX medium borderline ANS_LDOX__00001__sp_A0A2R6PI27_LDOX_ACTCC
Oglu02G0025080.1 Flavonoid ANS/LDOX medium borderline ANS_LDOX__00004__sp_O80449_JOX4_ARATH
Oglu02G0034890.1 Flavonoid ANS/LDOX medium borderline ANS_LDOX__00004__sp_O80449_JOX4_ARATH
Oglu03G0023210.1 Flavonoid ANS/LDOX medium borderline ANS_LDOX__00004__sp_O80449_JOX4_ARATH
Oglu03G0023210.2 Flavonoid ANS/LDOX medium borderline ANS_LDOX__00004__sp_O80449_JOX4_ARATH
Oglu06G0005160.2 Flavonoid ANS/LDOX medium borderline ANS_LDOX__00004__sp_O80449_JOX4_ARATH
Oglu06G0005160.3 Flavonoid ANS/LDOX medium borderline ANS_LDOX__00004__sp_O80449_JOX4_ARATH
Oglu06G0005160.4 Flavonoid ANS/LDOX medium borderline ANS_LDOX__00004__sp_O80449_JOX4_ARATH
Oglu06G0005180.1 Flavonoid ANS/LDOX medium borderline ANS_LDOX__00004__sp_O80449_JOX4_ARATH
Oglu06G0005180.2 Flavonoid ANS/LDOX medium borderline ANS_LDOX__00004__sp_O80449_JOX4_ARATH
Oglu10G0005130.1 Flavonoid ANS/LDOX low borderline ANS_LDOX__00005__sp_Q96323_LDOX_ARATH
Oglu10G0005130.2 Flavonoid ANS/LDOX low borderline ANS_LDOX__00005__sp_Q96323_LDOX_ARATH
Oglu10G0016730.1 Flavonoid ANS/LDOX medium borderline ANS_LDOX__00004__sp_O80449_JOX4_ARATH
Oglu10G0018080.1 Flavonoid ANS/LDOX medium borderline ANS_LDOX__00004__sp_O80449_JOX4_ARATH
Oglu10G0018080.2 Flavonoid ANS/LDOX medium borderline ANS_LDOX__00004__sp_O80449_JOX4_ARATH
Oglu10G0018080.3 Flavonoid ANS/LDOX medium borderline ANS_LDOX__00004__sp_O80449_JOX4_ARATH
Oglu10G0018150.1 Flavonoid ANS/LDOX medium borderline ANS_LDOX__00004__sp_O80449_JOX4_ARATH
Oglu10G0018150.2 Flavonoid ANS/LDOX medium borderline ANS_LDOX__00004__sp_O80449_JOX4_ARATH
Oglu10G0018150.3 Flavonoid ANS/LDOX medium borderline ANS_LDOX__00004__sp_O80449_JOX4_ARATH
Oglu11G0005180.1 Flavonoid ANS/LDOX medium borderline ANS_LDOX__00003__sp_O04274_LDOX_PERFR