PlantSME Plant secondary metabolism enzyme database

Oryza glumaepatula (oryza_glumaepatula)

Imported from atlas release summary for Oryza glumaepatula.

1971
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 585 19 BAHD (210) View species results
Alkaloid pathway 460 24 7DLGT (86) View species results
Flavonoid pathway 313 13 UFGT (179) View species results
Phenylpropanoid pathway 312 13 POD (108) View species results
Rosmarinic acid pathway 165 7 C4H (86) View species results
Steroid pathway 136 13 CAS (53) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2030 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 381 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3H
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Gene Pathway Family Confidence Status
Oglu01G0005430.1 Flavonoid F3H medium borderline
Oglu01G0006230.1 Flavonoid F3H low borderline
Oglu01G0006230.2 Flavonoid F3H low borderline
Oglu01G0015480.1 Flavonoid F3H low borderline
Oglu01G0016620.1 Flavonoid F3H medium borderline
Oglu01G0017870.1 Flavonoid F3H medium borderline
Oglu01G0018250.1 Flavonoid F3H medium borderline
Oglu01G0023910.1 Flavonoid F3H medium borderline
Oglu01G0034290.1 Flavonoid F3H low borderline
Oglu01G0035160.1 Flavonoid F3H medium borderline
Oglu01G0039570.1 Flavonoid F3H medium borderline
Oglu01G0043310.1 Flavonoid F3H medium borderline
Oglu01G0046970.1 Flavonoid F3H medium borderline
Oglu02G0012020.1 Flavonoid F3H low borderline
Oglu02G0012020.2 Flavonoid F3H low borderline
Oglu02G0012020.3 Flavonoid F3H low borderline
Oglu02G0022510.1 Flavonoid F3H medium pass
Oglu02G0033900.1 Flavonoid F3H medium borderline
Oglu03G0001710.1 Flavonoid F3H medium borderline
Oglu03G0013390.1 Flavonoid F3H medium borderline
Oglu03G0023170.1 Flavonoid F3H medium borderline
Oglu03G0026720.1 Flavonoid F3H low borderline
Oglu03G0030090.1 Flavonoid F3H medium borderline
Oglu03G0040910.1 Flavonoid F3H medium borderline
Oglu03G0040950.1 Flavonoid F3H medium pass
Oglu03G0041200.1 Flavonoid F3H medium borderline
Oglu04G0011050.1 Flavonoid F3H low borderline
Oglu04G0011050.2 Flavonoid F3H low borderline
Oglu04G0015570.1 Flavonoid F3H medium pass
Oglu04G0022360.1 Flavonoid F3H medium borderline
Oglu04G0022360.2 Flavonoid F3H medium borderline
Oglu04G0022370.1 Flavonoid F3H medium borderline
Oglu04G0027930.1 Flavonoid F3H medium borderline
Oglu04G0028270.1 Flavonoid F3H medium borderline
Oglu04G0028300.1 Flavonoid F3H medium borderline
Oglu05G0002000.1 Flavonoid F3H medium borderline
Oglu05G0003310.1 Flavonoid F3H medium borderline
Oglu05G0003320.1 Flavonoid F3H medium borderline
Oglu05G0003980.1 Flavonoid F3H medium pass
Oglu05G0003980.2 Flavonoid F3H medium pass
Oglu05G0004990.1 Flavonoid F3H medium borderline
Oglu05G0007160.1 Flavonoid F3H medium pass
Oglu05G0009300.1 Flavonoid F3H medium pass
Oglu05G0017710.1 Flavonoid F3H low borderline
Oglu05G0017710.2 Flavonoid F3H medium borderline
Oglu05G0017710.3 Flavonoid F3H medium pass
Oglu05G0023620.1 Flavonoid F3H medium borderline
Oglu05G0026880.1 Flavonoid F3H medium borderline
Oglu06G0004250.1 Flavonoid F3H medium borderline
Oglu06G0005160.1 Flavonoid F3H medium borderline