PlantSME Plant secondary metabolism enzyme database

Oryza glumaepatula (oryza_glumaepatula)

Imported from atlas release summary for Oryza glumaepatula.

1971
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 585 19 BAHD (210) View species results
Alkaloid pathway 460 24 7DLGT (86) View species results
Flavonoid pathway 313 13 UFGT (179) View species results
Phenylpropanoid pathway 312 13 POD (108) View species results
Rosmarinic acid pathway 165 7 C4H (86) View species results
Steroid pathway 136 13 CAS (53) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2030 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 381 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: PAL
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Gene Pathway Family Confidence Status Best Target
Oglu02G0024780.1 Flavonoid PAL high pass PAL__00008__sp_Q8VXG7_PALY_MAIZE
Oglu02G0024800.1 Flavonoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Oglu02G0024810.1 Flavonoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Oglu02G0024820.1 Flavonoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Oglu04G0018540.1 Flavonoid PAL high pass PAL__00008__sp_Q8VXG7_PALY_MAIZE
Oglu04G0018550.1 Flavonoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Oglu05G0018040.1 Flavonoid PAL medium pass PAL__00001__sp_P24481_PAL1_PETCR
Oglu08G0010780.1 Flavonoid PAL low borderline PAL__00001__sp_P24481_PAL1_PETCR
Oglu11G0022790.1 Flavonoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Oglu02G0024780.1 Phenylpropanoid PAL high pass PAL__00008__sp_Q8VXG7_PALY_MAIZE
Oglu02G0024800.1 Phenylpropanoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Oglu02G0024810.1 Phenylpropanoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Oglu02G0024820.1 Phenylpropanoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Oglu04G0018540.1 Phenylpropanoid PAL high pass PAL__00008__sp_Q8VXG7_PALY_MAIZE
Oglu04G0018550.1 Phenylpropanoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Oglu05G0018040.1 Phenylpropanoid PAL medium pass PAL__00001__sp_P24481_PAL1_PETCR
Oglu08G0010780.1 Phenylpropanoid PAL low borderline PAL__00001__sp_P24481_PAL1_PETCR
Oglu11G0022790.1 Phenylpropanoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Oglu02G0024780.1 Rosmarinic Acid PAL high pass PAL__00008__sp_Q8VXG7_PALY_MAIZE
Oglu02G0024800.1 Rosmarinic Acid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Oglu02G0024810.1 Rosmarinic Acid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Oglu02G0024820.1 Rosmarinic Acid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Oglu04G0018540.1 Rosmarinic Acid PAL high pass PAL__00008__sp_Q8VXG7_PALY_MAIZE
Oglu04G0018550.1 Rosmarinic Acid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Oglu05G0018040.1 Rosmarinic Acid PAL medium pass PAL__00001__sp_P24481_PAL1_PETCR
Oglu08G0010780.1 Rosmarinic Acid PAL low borderline PAL__00001__sp_P24481_PAL1_PETCR
Oglu11G0022790.1 Rosmarinic Acid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR