PlantSME Plant secondary metabolism enzyme database

Oryza glumaepatula (oryza_glumaepatula)

Imported from atlas release summary for Oryza glumaepatula.

1971
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 585 19 BAHD (210) View species results
Alkaloid pathway 460 24 7DLGT (86) View species results
Flavonoid pathway 313 13 UFGT (179) View species results
Phenylpropanoid pathway 312 13 POD (108) View species results
Rosmarinic acid pathway 165 7 C4H (86) View species results
Steroid pathway 136 13 CAS (53) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2030 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 381 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: PMT
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Gene Pathway Family Confidence Status
Oglu01G0000380.1 Alkaloid PMT low borderline
Oglu01G0005550.1 Alkaloid PMT medium pass
Oglu01G0006020.1 Alkaloid PMT medium pass
Oglu01G0016500.1 Alkaloid PMT medium pass
Oglu01G0026070.1 Alkaloid PMT medium pass
Oglu01G0026080.1 Alkaloid PMT medium pass
Oglu02G0010090.1 Alkaloid PMT medium pass
Oglu02G0010710.1 Alkaloid PMT medium borderline
Oglu02G0010710.2 Alkaloid PMT medium borderline
Oglu03G0030390.1 Alkaloid PMT low borderline
Oglu04G0002280.1 Alkaloid PMT medium pass
Oglu04G0003070.1 Alkaloid PMT medium pass
Oglu04G0017380.1 Alkaloid PMT low borderline
Oglu04G0017380.2 Alkaloid PMT low borderline
Oglu05G0001650.1 Alkaloid PMT low borderline
Oglu05G0002510.1 Alkaloid PMT medium pass
Oglu05G0005080.1 Alkaloid PMT medium pass
Oglu05G0010030.1 Alkaloid PMT medium pass
Oglu05G0011790.1 Alkaloid PMT medium pass
Oglu06G0005670.1 Alkaloid PMT low borderline
Oglu06G0005700.1 Alkaloid PMT medium pass
Oglu06G0017910.1 Alkaloid PMT medium borderline
Oglu06G0020720.1 Alkaloid PMT medium pass
Oglu06G0020750.1 Alkaloid PMT medium pass
Oglu06G0020770.1 Alkaloid PMT medium pass
Oglu06G0027270.1 Alkaloid PMT medium pass
Oglu06G0028060.1 Alkaloid PMT medium pass
Oglu07G0010590.1 Alkaloid PMT medium borderline
Oglu07G0020020.1 Alkaloid PMT medium pass
Oglu08G0006340.1 Alkaloid PMT low borderline
Oglu08G0023260.1 Alkaloid PMT low borderline
Oglu08G0023260.2 Alkaloid PMT low borderline
Oglu09G0010830.1 Alkaloid PMT medium pass
Oglu10G0000310.1 Alkaloid PMT low borderline
Oglu10G0000330.1 Alkaloid PMT medium borderline
Oglu10G0000980.1 Alkaloid PMT medium pass
Oglu10G0001660.1 Alkaloid PMT low borderline
Oglu10G0014560.1 Alkaloid PMT medium pass
Oglu11G0004860.1 Alkaloid PMT low borderline
Oglu12G0007810.1 Alkaloid PMT medium pass