PlantSME Plant secondary metabolism enzyme database

Ocimum basilicum (ocimum_basilicum)

Imported from atlas release summary for Ocimum basilicum.

4737
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1561 19 BAHD (533) View species results
Alkaloid pathway 913 24 GES (214) View species results
Phenylpropanoid pathway 903 13 POD (251) View species results
Rosmarinic acid pathway 611 7 C4H (314) View species results
Flavonoid pathway 564 15 UFGT (391) View species results
Steroid pathway 185 12 CAS (93) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 5896 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1231 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status Best Target
ocimum_basilicum_1177.g52.t1 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
ocimum_basilicum_1177.g53.t1 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
ocimum_basilicum_1177.g54.t1 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
ocimum_basilicum_1188.g69.t1 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
ocimum_basilicum_1188.g70.t1 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
ocimum_basilicum_1188.g73.t1 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
ocimum_basilicum_1886.g21.t1 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
ocimum_basilicum_1913.g89.t1 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
ocimum_basilicum_1913.g90.t1 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
ocimum_basilicum_1961.g24.t1 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
ocimum_basilicum_302985.g1.t1 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
ocimum_basilicum_354090.g1.t1 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
ocimum_basilicum_354090.g2.t1 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
ocimum_basilicum_364027.g2.t1 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
ocimum_basilicum_375161.g7.t1 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
ocimum_basilicum_375425.g3.t1 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
ocimum_basilicum_377356.g1.t1 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
ocimum_basilicum_378949.g30.t1 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
ocimum_basilicum_381013.g14.t1 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
ocimum_basilicum_382674.g5.t1 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
ocimum_basilicum_382779.g38.t1 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
ocimum_basilicum_382779.g39.t1 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
ocimum_basilicum_382938.g30.t1 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
ocimum_basilicum_382992.g1.t1 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
ocimum_basilicum_384002.g28.t1 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
ocimum_basilicum_384473.g59.t1 Alkaloid 16OMT medium pass 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
ocimum_basilicum_384815.g79.t1 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
ocimum_basilicum_385008.g5.t1 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
ocimum_basilicum_385008.g6.t1 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
ocimum_basilicum_385016.g17.t1 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
ocimum_basilicum_385016.g19.t1 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
ocimum_basilicum_385027.g11.t1 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
ocimum_basilicum_385232.g2.t1 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
ocimum_basilicum_385816.g1.t1 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
ocimum_basilicum_385816.g4.t1 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
ocimum_basilicum_385816.g7.t1 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
ocimum_basilicum_385816.g9.t1 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
ocimum_basilicum_385998.g4.t1 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
ocimum_basilicum_385998.g7.t1 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
ocimum_basilicum_385998.g8.t1 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
ocimum_basilicum_386066.g79.t1 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
ocimum_basilicum_473752.g2.t1 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
ocimum_basilicum_473753.g2.t1 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
ocimum_basilicum_520.g165.t1 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
ocimum_basilicum_542.g54.t1 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
ocimum_basilicum_542.g65.t1 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
ocimum_basilicum_551.g140.t1 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
ocimum_basilicum_560.g46.t1 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
ocimum_basilicum_685.g47.t1 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
ocimum_basilicum_701.g103.t1 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO