PlantSME Plant secondary metabolism enzyme database

Ocimum basilicum (ocimum_basilicum)

Imported from atlas release summary for Ocimum basilicum.

4737
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1561 19 BAHD (533) View species results
Alkaloid pathway 913 24 GES (214) View species results
Phenylpropanoid pathway 903 13 POD (251) View species results
Rosmarinic acid pathway 611 7 C4H (314) View species results
Flavonoid pathway 564 15 UFGT (391) View species results
Steroid pathway 185 12 CAS (93) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 5896 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1231 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T16H
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Gene Pathway Family Confidence Status
ocimum_basilicum_1259.g1.t1 Alkaloid T16H medium borderline
ocimum_basilicum_1276.g38.t1 Alkaloid T16H medium borderline
ocimum_basilicum_1538.g4.t1 Alkaloid T16H medium borderline
ocimum_basilicum_1551.g114.t1 Alkaloid T16H medium borderline
ocimum_basilicum_1583.g37.t1 Alkaloid T16H medium borderline
ocimum_basilicum_1822.g13.t1 Alkaloid T16H medium borderline
ocimum_basilicum_1834.g9.t1 Alkaloid T16H medium borderline
ocimum_basilicum_1842.g63.t1 Alkaloid T16H medium borderline
ocimum_basilicum_1869.g23.t1 Alkaloid T16H medium borderline
ocimum_basilicum_1874.g14.t1 Alkaloid T16H medium borderline
ocimum_basilicum_1874.g16.t1 Alkaloid T16H medium borderline
ocimum_basilicum_1874.g19.t1 Alkaloid T16H medium borderline
ocimum_basilicum_1874.g20.t1 Alkaloid T16H medium borderline
ocimum_basilicum_1924.g92.t1 Alkaloid T16H medium borderline
ocimum_basilicum_1949.g120.t1 Alkaloid T16H low borderline
ocimum_basilicum_1950.g60.t1 Alkaloid T16H medium borderline
ocimum_basilicum_1950.g61.t1 Alkaloid T16H medium borderline
ocimum_basilicum_1950.g62.t1 Alkaloid T16H medium borderline
ocimum_basilicum_1950.g63.t1 Alkaloid T16H medium borderline
ocimum_basilicum_1950.g64.t1 Alkaloid T16H medium borderline
ocimum_basilicum_1950.g76.t1 Alkaloid T16H medium borderline
ocimum_basilicum_1950.g81.t1 Alkaloid T16H medium borderline
ocimum_basilicum_1953.g63.t1 Alkaloid T16H medium borderline
ocimum_basilicum_1964.g95.t1 Alkaloid T16H low borderline
ocimum_basilicum_1980.g51.t1 Alkaloid T16H medium borderline
ocimum_basilicum_248903.g1.t1 Alkaloid T16H medium borderline
ocimum_basilicum_308.g226.t1 Alkaloid T16H medium borderline
ocimum_basilicum_313193.g4.t1 Alkaloid T16H medium borderline
ocimum_basilicum_331820.g2.t1 Alkaloid T16H medium borderline
ocimum_basilicum_337263.g1.t1 Alkaloid T16H medium borderline
ocimum_basilicum_353691.g4.t1 Alkaloid T16H medium borderline
ocimum_basilicum_358833.g1.t1 Alkaloid T16H medium borderline
ocimum_basilicum_360852.g1.t1 Alkaloid T16H medium borderline
ocimum_basilicum_360863.g3.t1 Alkaloid T16H medium borderline
ocimum_basilicum_364722.g2.t1 Alkaloid T16H medium borderline
ocimum_basilicum_366893.g2.t1 Alkaloid T16H medium borderline
ocimum_basilicum_370334.g2.t1 Alkaloid T16H medium borderline
ocimum_basilicum_372726.g6.t1 Alkaloid T16H medium borderline
ocimum_basilicum_372726.g7.t1 Alkaloid T16H medium borderline
ocimum_basilicum_374289.g1.t1 Alkaloid T16H medium borderline
ocimum_basilicum_376503.g1.t1 Alkaloid T16H medium borderline
ocimum_basilicum_377032.g7.t1 Alkaloid T16H medium borderline
ocimum_basilicum_377364.g6.t1 Alkaloid T16H medium borderline
ocimum_basilicum_377399.g1.t1 Alkaloid T16H medium borderline
ocimum_basilicum_377816.g10.t1 Alkaloid T16H medium borderline
ocimum_basilicum_377816.g6.t1 Alkaloid T16H medium borderline
ocimum_basilicum_377816.g8.t1 Alkaloid T16H medium borderline
ocimum_basilicum_378681.g9.t1 Alkaloid T16H medium borderline
ocimum_basilicum_379.g71.t1 Alkaloid T16H medium borderline
ocimum_basilicum_379021.g3.t1 Alkaloid T16H medium borderline