PlantSME Plant secondary metabolism enzyme database

Ocimum basilicum (ocimum_basilicum)

Imported from atlas release summary for Ocimum basilicum.

4737
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1561 19 BAHD (533) View species results
Alkaloid pathway 913 24 GES (214) View species results
Phenylpropanoid pathway 903 13 POD (251) View species results
Rosmarinic acid pathway 611 7 C4H (314) View species results
Flavonoid pathway 564 15 UFGT (391) View species results
Steroid pathway 185 12 CAS (93) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 5896 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1231 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: GES
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Gene Pathway Family Confidence Status Best Target
ocimum_basilicum_1032.g14.t1 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
ocimum_basilicum_1032.g24.t1 Alkaloid GES medium pass GES__00009__sp_Q8GUE4_GERS_CINTE
ocimum_basilicum_1032.g29.t1 Alkaloid GES medium pass GES__00001__sp_A0A7G5KLV3_TPS4_CANOD
ocimum_basilicum_1032.g30.t1 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
ocimum_basilicum_1032.g36.t1 Alkaloid GES low borderline GES__00001__sp_A0A7G5KLV3_TPS4_CANOD
ocimum_basilicum_1032.g37.t1 Alkaloid GES medium pass GES__00009__sp_Q8GUE4_GERS_CINTE
ocimum_basilicum_1062.g27.t1 Alkaloid GES low borderline GES__00008__sp_Q84ZW8_ACSS_MAIZE
ocimum_basilicum_1072.g1.t1 Alkaloid GES medium pass GES__00009__sp_Q8GUE4_GERS_CINTE
ocimum_basilicum_1175.g12.t1 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
ocimum_basilicum_1204.g3.t1 Alkaloid GES low borderline GES__00011__sp_R9QMR5_ATERP_PINBN
ocimum_basilicum_1209.g7.t1 Alkaloid GES medium pass GES__00001__sp_A0A7G5KLV3_TPS4_CANOD
ocimum_basilicum_1222.g1.t1 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
ocimum_basilicum_1231.g1.t1 Alkaloid GES medium pass GES__00007__sp_Q6USK1_GERS_OCIBA
ocimum_basilicum_1231.g2.t1 Alkaloid GES medium pass GES__00007__sp_Q6USK1_GERS_OCIBA
ocimum_basilicum_1231.g4.t1 Alkaloid GES medium pass GES__00007__sp_Q6USK1_GERS_OCIBA
ocimum_basilicum_1242.g52.t1 Alkaloid GES medium pass GES__00002__sp_C0KWV4_GRNLG_PERFH
ocimum_basilicum_1298.g3.t1 Alkaloid GES medium pass GES__00008__sp_Q84ZW8_ACSS_MAIZE
ocimum_basilicum_1437.g14.t1 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
ocimum_basilicum_1437.g18.t1 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
ocimum_basilicum_1437.g19.t1 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
ocimum_basilicum_1513.g10.t1 Alkaloid GES low borderline GES__00011__sp_R9QMR5_ATERP_PINBN
ocimum_basilicum_1513.g12.t1 Alkaloid GES low borderline GES__00008__sp_Q84ZW8_ACSS_MAIZE
ocimum_basilicum_1513.g13.t1 Alkaloid GES medium pass GES__00008__sp_Q84ZW8_ACSS_MAIZE
ocimum_basilicum_1521.g15.t1 Alkaloid GES medium pass GES__00008__sp_Q84ZW8_ACSS_MAIZE
ocimum_basilicum_1574.g24.t1 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
ocimum_basilicum_1574.g25.t1 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
ocimum_basilicum_1574.g26.t1 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
ocimum_basilicum_1574.g27.t1 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
ocimum_basilicum_1574.g28.t1 Alkaloid GES low borderline GES__00001__sp_A0A7G5KLV3_TPS4_CANOD
ocimum_basilicum_1574.g29.t1 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
ocimum_basilicum_1574.g30.t1 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
ocimum_basilicum_1574.g31.t1 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
ocimum_basilicum_1574.g32.t1 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
ocimum_basilicum_1574.g33.t1 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
ocimum_basilicum_1574.g34.t1 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
ocimum_basilicum_1574.g35.t1 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
ocimum_basilicum_1574.g36.t1 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
ocimum_basilicum_1574.g37.t1 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
ocimum_basilicum_1574.g65.t1 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
ocimum_basilicum_1574.g66.t1 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
ocimum_basilicum_1574.g67.t1 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
ocimum_basilicum_1574.g68.t1 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
ocimum_basilicum_1574.g69.t1 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
ocimum_basilicum_1574.g70.t1 Alkaloid GES medium pass GES__00009__sp_Q8GUE4_GERS_CINTE
ocimum_basilicum_1574.g71.t1 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
ocimum_basilicum_1593.g71.t1 Alkaloid GES medium pass GES__00009__sp_Q8GUE4_GERS_CINTE
ocimum_basilicum_1601.g49.t1 Alkaloid GES medium pass GES__00007__sp_Q6USK1_GERS_OCIBA
ocimum_basilicum_1800.g10.t1 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
ocimum_basilicum_1800.g2.t1 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
ocimum_basilicum_1800.g7.t1 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU