PlantSME Plant secondary metabolism enzyme database

Ocimum basilicum (ocimum_basilicum)

Imported from atlas release summary for Ocimum basilicum.

4737
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1561 19 BAHD (533) View species results
Alkaloid pathway 913 24 GES (214) View species results
Phenylpropanoid pathway 903 13 POD (251) View species results
Rosmarinic acid pathway 611 7 C4H (314) View species results
Flavonoid pathway 564 15 UFGT (391) View species results
Steroid pathway 185 12 CAS (93) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 5896 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1231 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NCS
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Gene Pathway Family Confidence Status Best Target
ocimum_basilicum_1289.g1.t1 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
ocimum_basilicum_1701.g183.t1 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
ocimum_basilicum_1701.g187.t1 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
ocimum_basilicum_1842.g84.t1 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
ocimum_basilicum_1968.g154.t1 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
ocimum_basilicum_1986.g42.t1 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
ocimum_basilicum_325413.g1.t1 Alkaloid NCS low borderline NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
ocimum_basilicum_343677.g1.t1 Alkaloid NCS medium pass NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
ocimum_basilicum_350670.g2.t1 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
ocimum_basilicum_368820.g2.t1 Alkaloid NCS low borderline NCS__00005__sp_Q67A25_NCS_THLFG
ocimum_basilicum_371.g77.t1 Alkaloid NCS low borderline NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
ocimum_basilicum_372357.g2.t1 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
ocimum_basilicum_375.g167.t1 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
ocimum_basilicum_377604.g3.t1 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
ocimum_basilicum_377612.g1.t1 Alkaloid NCS low borderline NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
ocimum_basilicum_380969.g21.t1 Alkaloid NCS low borderline NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
ocimum_basilicum_381392.g1.t1 Alkaloid NCS medium pass NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
ocimum_basilicum_381392.g2.t1 Alkaloid NCS low borderline NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
ocimum_basilicum_381812.g37.t1 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
ocimum_basilicum_382389.g40.t1 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
ocimum_basilicum_382720.g46.t1 Alkaloid NCS low borderline NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
ocimum_basilicum_382758.g31.t1 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
ocimum_basilicum_382772.g101.t1 Alkaloid NCS medium pass NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
ocimum_basilicum_382772.g102.t1 Alkaloid NCS low borderline NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
ocimum_basilicum_382772.g105.t1 Alkaloid NCS low borderline NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
ocimum_basilicum_382772.g75.t1 Alkaloid NCS low borderline NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
ocimum_basilicum_382772.g76.t1 Alkaloid NCS low borderline NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
ocimum_basilicum_382772.g80.t1 Alkaloid NCS medium pass NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
ocimum_basilicum_382772.g82.t1 Alkaloid NCS low borderline NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
ocimum_basilicum_382772.g84.t1 Alkaloid NCS low borderline NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
ocimum_basilicum_382772.g86.t1 Alkaloid NCS low borderline NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
ocimum_basilicum_382772.g87.t1 Alkaloid NCS medium pass NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
ocimum_basilicum_382772.g88.t1 Alkaloid NCS medium pass NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
ocimum_basilicum_382772.g91.t1 Alkaloid NCS medium borderline NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
ocimum_basilicum_382772.g92.t1 Alkaloid NCS low borderline NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
ocimum_basilicum_382772.g94.t1 Alkaloid NCS medium pass NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
ocimum_basilicum_382772.g95.t1 Alkaloid NCS low borderline NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
ocimum_basilicum_382772.g96.t1 Alkaloid NCS medium pass NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
ocimum_basilicum_382772.g97.t1 Alkaloid NCS low borderline NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
ocimum_basilicum_382772.g98.t1 Alkaloid NCS low borderline NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
ocimum_basilicum_382779.g22.t1 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
ocimum_basilicum_382992.g100.t1 Alkaloid NCS medium pass NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
ocimum_basilicum_382992.g104.t1 Alkaloid NCS low borderline NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
ocimum_basilicum_382992.g107.t1 Alkaloid NCS medium pass NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
ocimum_basilicum_382992.g109.t1 Alkaloid NCS low borderline NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
ocimum_basilicum_382992.g78.t1 Alkaloid NCS medium pass NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
ocimum_basilicum_382992.g81.t1 Alkaloid NCS medium pass NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
ocimum_basilicum_382992.g82.t1 Alkaloid NCS medium pass NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
ocimum_basilicum_382992.g84.t1 Alkaloid NCS low borderline NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
ocimum_basilicum_382992.g88.t1 Alkaloid NCS medium pass NCS__00003__sp_Q4QTJ1_NCS2_PAPSO