PlantSME Plant secondary metabolism enzyme database

Ocimum basilicum (ocimum_basilicum)

Imported from atlas release summary for Ocimum basilicum.

4737
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1561 19 BAHD (533) View species results
Alkaloid pathway 913 24 GES (214) View species results
Phenylpropanoid pathway 903 13 POD (251) View species results
Rosmarinic acid pathway 611 7 C4H (314) View species results
Flavonoid pathway 564 15 UFGT (391) View species results
Steroid pathway 185 12 CAS (93) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 5896 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1231 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NMT
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Gene Pathway Family Confidence Status Best Target
ocimum_basilicum_1086.g5.t1 Alkaloid NMT medium pass NMT__00046__sp_Q8VZ17_SUVH6_ARATH
ocimum_basilicum_1188.g72.t1 Alkaloid NMT medium borderline NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI
ocimum_basilicum_1211.g15.t1 Alkaloid NMT low borderline NMT__00049__sp_Q93YF5_SUVH1_TOBAC
ocimum_basilicum_1282.g13.t1 Alkaloid NMT low borderline NMT__00067__sp_Q9T0G7_SUVH9_ARATH
ocimum_basilicum_1288.g10.t1 Alkaloid NMT medium pass NMT__00049__sp_Q93YF5_SUVH1_TOBAC
ocimum_basilicum_1380.g1.t1 Alkaloid NMT medium borderline NMT__00057__sp_Q9FR44_PEAM1_ARATH
ocimum_basilicum_1548.g5.t1 Alkaloid NMT medium pass NMT__00049__sp_Q93YF5_SUVH1_TOBAC
ocimum_basilicum_1557.g10.t1 Alkaloid NMT medium borderline NMT__00007__sp_A0A6C0WX00_CKTBS_CAMSB
ocimum_basilicum_1630.g46.t1 Alkaloid NMT medium pass NMT__00039__sp_Q84W92_ANM13_ARATH
ocimum_basilicum_1641.g6.t1 Alkaloid NMT medium pass NMT__00048__sp_Q8W595_SUVR4_ARATH
ocimum_basilicum_1659.g60.t1 Alkaloid NMT low borderline NMT__00054__sp_Q9FF80_SUVH1_ARATH
ocimum_basilicum_1688.g19.t1 Alkaloid NMT medium pass NMT__00040__sp_Q84WW6_ASHH1_ARATH
ocimum_basilicum_1702.g32.t1 Alkaloid NMT low borderline NMT__00016__sp_F4JNX3_CMKMT_ARATH
ocimum_basilicum_1805.g5.t1 Alkaloid NMT medium pass NMT__00069__sp_Q9ZSM8_EZA1_ARATH
ocimum_basilicum_1816.g5.t1 Alkaloid NMT low borderline NMT__00065__sp_Q9SEH7_PMT2_TOBAC
ocimum_basilicum_1823.g31.t1 Alkaloid NMT low borderline NMT__00056__sp_Q9FNE9_ATXR6_ARATH
ocimum_basilicum_1879.g96.t1 Alkaloid NMT medium pass NMT__00039__sp_Q84W92_ANM13_ARATH
ocimum_basilicum_1886.g98.t1 Alkaloid NMT medium borderline NMT__00050__sp_Q944H0_PEAM2_ARATH
ocimum_basilicum_1889.g5.t1 Alkaloid NMT low borderline NMT__00046__sp_Q8VZ17_SUVH6_ARATH
ocimum_basilicum_1892.g5.t1 Alkaloid NMT medium borderline NMT__00070__sp_W5U2K2_NMT_CATRO
ocimum_basilicum_1909.g6.t1 Alkaloid NMT low borderline NMT__00028__sp_Q2LAE1_ASHH2_ARATH
ocimum_basilicum_1913.g84.t1 Alkaloid NMT low borderline NMT__00007__sp_A0A6C0WX00_CKTBS_CAMSB
ocimum_basilicum_1934.g41.t1 Alkaloid NMT low borderline NMT__00041__sp_Q8GWT4_ANM15_ARATH
ocimum_basilicum_1952.g27.t1 Alkaloid NMT low borderline NMT__00056__sp_Q9FNE9_ATXR6_ARATH
ocimum_basilicum_1961.g71.t1 Alkaloid NMT medium borderline NMT__00050__sp_Q944H0_PEAM2_ARATH
ocimum_basilicum_314203.g1.t1 Alkaloid NMT low borderline NMT__00041__sp_Q8GWT4_ANM15_ARATH
ocimum_basilicum_321209.g1.t1 Alkaloid NMT medium borderline NMT__00007__sp_A0A6C0WX00_CKTBS_CAMSB
ocimum_basilicum_330919.g1.t1 Alkaloid NMT medium pass NMT__00055__sp_Q9FNC7_SUVR2_ARATH
ocimum_basilicum_337942.g5.t1 Alkaloid NMT medium pass NMT__00017__sp_F4K1J4_ATXR7_ARATH
ocimum_basilicum_346062.g3.t1 Alkaloid NMT medium pass NMT__00067__sp_Q9T0G7_SUVH9_ARATH
ocimum_basilicum_360892.g2.t1 Alkaloid NMT medium pass NMT__00049__sp_Q93YF5_SUVH1_TOBAC
ocimum_basilicum_368473.g1.t1 Alkaloid NMT medium pass NMT__00055__sp_Q9FNC7_SUVR2_ARATH
ocimum_basilicum_371.g32.t1 Alkaloid NMT medium pass NMT__00039__sp_Q84W92_ANM13_ARATH
ocimum_basilicum_371.g33.t1 Alkaloid NMT low borderline NMT__00039__sp_Q84W92_ANM13_ARATH
ocimum_basilicum_371768.g3.t1 Alkaloid NMT low borderline NMT__00056__sp_Q9FNE9_ATXR6_ARATH
ocimum_basilicum_373630.g1.t1 Alkaloid NMT low borderline NMT__00056__sp_Q9FNE9_ATXR6_ARATH
ocimum_basilicum_374.g98.t1 Alkaloid NMT low borderline NMT__00060__sp_Q9MAT5_ANM10_ARATH
ocimum_basilicum_375849.g11.t1 Alkaloid NMT medium pass NMT__00035__sp_Q6K431_TRX1_ORYSJ
ocimum_basilicum_375849.g3.t1 Alkaloid NMT medium pass NMT__00067__sp_Q9T0G7_SUVH9_ARATH
ocimum_basilicum_375849.g4.t1 Alkaloid NMT medium pass NMT__00019__sp_O22781_SUVH2_ARATH
ocimum_basilicum_375960.g5.t1 Alkaloid NMT medium pass NMT__00021__sp_O64827_SUVR5_ARATH
ocimum_basilicum_376.g169.t1 Alkaloid NMT low borderline NMT__00046__sp_Q8VZ17_SUVH6_ARATH
ocimum_basilicum_377395.g10.t1 Alkaloid NMT low borderline NMT__00056__sp_Q9FNE9_ATXR6_ARATH
ocimum_basilicum_377745.g5.t1 Alkaloid NMT medium pass NMT__00067__sp_Q9T0G7_SUVH9_ARATH
ocimum_basilicum_378418.g23.t1 Alkaloid NMT low borderline NMT__00056__sp_Q9FNE9_ATXR6_ARATH
ocimum_basilicum_378676.g29.t1 Alkaloid NMT medium pass NMT__00049__sp_Q93YF5_SUVH1_TOBAC
ocimum_basilicum_378743.g11.t1 Alkaloid NMT medium pass NMT__00035__sp_Q6K431_TRX1_ORYSJ
ocimum_basilicum_379013.g2.t1 Alkaloid NMT medium pass NMT__00017__sp_F4K1J4_ATXR7_ARATH
ocimum_basilicum_379969.g12.t1 Alkaloid NMT medium pass NMT__00049__sp_Q93YF5_SUVH1_TOBAC
ocimum_basilicum_380032.g7.t1 Alkaloid NMT medium pass NMT__00046__sp_Q8VZ17_SUVH6_ARATH